Corvus cornix (hooded crow): 104683891
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Entry
104683891 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104683891
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
104683891
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Ig_3
Ig_2
CarboxypepD_reg
I-set
CarbopepD_reg_2
ig
TSP1_spondin
TSP_1
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
104683891
NCBI-ProteinID:
XP_019136357
LinkDB
All DBs
Position
10:complement(10431569..10442785)
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AA seq
1108 aa
AA seq
DB search
MVTMKAWILLLLLGATSVLGQRILKPALSRVQIGPKTFSPLVMLSMESTRSSSRQGDPTF
TYIRRSPLVQDSKRFLSPWSKWSECSAKCGQTGVQKRTRSCLAERLWGVHCNEATEEGRL
CIGHVCSACNITCPMGRVNADCDSCMCEDATLHGKVSLEDGSPAAXARVYLQAKKLKLLT
MADNRGMFRIPGVCPDGKNTLKIKKAKYATATVTVPESDRRNLAIQVQLHRSGKPYVFRS
PEDKARRVGQSVSLCCDARGSPAPDRYLWYHNGSLLDPSLYKYKNNLILKNLNSGQSGEY
FCKASSAGGSAKSQVAKLAVIGRQEAACDPQPQSHLIRLPHDCFQKATNSFYYDVGKCPA
KTCVGKLDKGLRCKDNVSYCCGVSKMETRDISCDGYTLPTKVIIECGCKICTETKIMVRG
RATAADNGEPLRFGHIYMGNKRVSMTGYKGTFSIHIPADTERLVLTFVDRLQKFVNTTKV
LPFKENGGAVFHEIKLLRKKAPVTLESTETNVISLGEMEEDDPIAELEIPPNAFYRKNGE
VYSGKVKASVTFLDPRNITTAPVTQSDLNFVDEEGDVFPLRTYGMFSVDFTDEQGTESLN
AEEVKVHLDAAQVKMPEHLQEMKLWSLNPETGLWEEEGDFNIEKSTRRKREERTFLVGNM
EIKERRLFNLDVPESRRCYVKVRAYRSERFLQSEQIQGVVISIINTEPEPGFSSNPRAWG
RFDSVVTGPNGACVPAFCDEQNPEAYGAYILASMGGEELEAVPSAPKLNPAAIGVPQPYL
NKLNYRRTDHEDSNIKKTAFSINVAKPSPNSPEENNGPIYAYENLSECEEAPHSAAHFRF
YRIEGDRYDYNTVPFSEDDLMSWTDDYLAWWPKPMEFRACYIKVKINGPQEVNVRSRNMG
GTHPRTIGKLYGIRDVRSIRDPRQRDVSAACLEFKCSGMLFDQDRVDRTLVKVVPQGNCR
RVSVNSMLHEYLVNHLPMATNNDTSEYTMLAPLDPLGHNYGIYTVTDQDPRIAKEIALGR
CFDGTSDGTSRTMKSDVGVGLTFTCSERSATEQSIFQSQRNLGQQSPRNSGQQSILVLPG
QSPVYQRPPASRRNNQARIPMRGQRPTY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccatgaaagcctggatcctcctcctcctcttgggagccacatccgttttagga
caaaggattctgaaaccagccctcagcagggtccagataggaccgaaaaccttcagcccg
ctggtaatgctcagcatggagagtacaaggagcagctctcgccagggagacccgaccttc
acctacatcagacgcagtccactggtgcaagattcaaaaaggtttttgtctccatggtcg
aaatggagcgagtgctctgcaaagtgtggccaaaccggggtgcagaagcgtaccagatcc
tgcctagctgagcgcctctggggcgtgcactgtaatgaagcaactgaggaagggcggctc
tgcattggacatgtttgctcagcctgcaacatcacctgccctatgggccgtgtcaatgcc
gactgtgacagctgcatgtgtgaggatgccaccctgcacgggaaggtgtctctcgaggat
gggtcacctgctgcgnatgcccgggtctacctgcaagccaagaaactcaagctgttgaca
atggccgataacagaggcatgtttaggatccctggagtctgtcctgatgggaaaaacacc
cttaaaataaagaaagccaaatatgcaacagcgactgtcaccgtgcctgaaagcgaccgg
agaaacctggcaatccaagtgcaactgcaccgatcaggcaaaccctacgttttcaggagc
cctgaggacaaagccaggagagtgggacagagtgtgtcactctgctgtgatgcccgaggg
agcccagcccccgaccgctacctctggtaccacaatggctcactactggatccctccttg
tacaaatataaaaacaacctgattctgaagaacctgaacagtggacagtcaggagagtat
ttctgcaaggccagcagtgctggggggtcggcaaagtcccaagttgccaagctggctgtc
ataggaagacaagaggcagcctgtgacccccaaccccaaagccacctcatccgacttcct
catgattgcttccaaaaagcaacaaactccttctactatgatgtgggcaagtgcccagca
aagacctgtgtggggaagctggataagggacttcggtgtaaggacaatgtctcctactgc
tgcggggtatccaagatggaaaccagggacatctcctgcgatggctacacactccccact
aaagtcattatcgaatgtgggtgcaaaatatgcaccgagaccaaaataatggttcgaggc
agagccacagcagcagataatggtgagccactgaggtttggccacatttacatggggaac
aagagagtgagtatgaccggctacaagggaaccttctccatccacattccagcagatacg
gagagactggttctaacttttgtggatcgactgcagaagtttgtgaacacaacgaaagtt
ctgcccttcaaggaaaatggaggtgctgtatttcatgaaatcaagctactaagaaagaaa
gcccctgttacactggaatccaccgaaacaaatgtgatttctttgggggaaatggaagaa
gatgatccaattgctgaattagaaattcctcccaatgcattttataggaaaaatggagag
gtctacagtggcaaagtgaaagccagcgtgacatttctggacccgagaaacatcaccaca
gcccctgtgacgcaaagtgatctgaactttgtagatgaggaaggagatgtatttccgctc
cgcacatatggcatgttttctgtggacttcacggatgaacagggtacagagtccctcaat
gcagaagaggtgaaggttcatttggatgctgctcaggtcaagatgccagagcacctgcaa
gagatgaagctttggtccctgaacccagagacaggcttatgggaggaagaaggggacttc
aacattgaaaaaagcacacggcgcaaacgggaggagagaacttttttggttgggaacatg
gagatcaaagagaggcgtctctttaacctggatgtccctgagagcagacggtgctatgtc
aaagtccgagcctacagaagcgagagatttctgcaaagcgagcagatccaaggggttgta
atttctattataaacacggagccagaaccagggttctcctccaaccccagagcatggggc
cgtttcgacagcgtagtcactggtcctaatggtgcctgtgtgcccgctttctgtgacgag
caaaaccccgaggcctacggagcttatatcttggcgagcatggggggtgaagagctcgaa
gctgtgccctctgctcccaaactcaaccctgctgctattggggtcccacagccatacctc
aacaagctcaactacaggaggacagaccacgaggactccaacattaagaaaacagcattc
agcattaatgtggccaagccaagccctaattccccagaagagaacaacggccctatttat
gcctacgaaaacctcagtgaatgcgaggaagctccacacagtgctgctcacttcaggttt
tacaggatagaaggagaccggtacgactacaacactgttcccttcagtgaagatgacctc
atgagctggacggatgactacctggcgtggtggcccaaacccatggaatttagggcctgc
tacattaaagtaaaaataaatgggccccaggaggtgaatgtaagatctcgtaacatgggt
gggacgcacccacgcaccattggcaaactctatggcatcagggatgtccgtagcatccgt
gacccccggcagcgggacgtgtcggcagcctgcctggagttcaagtgcagcggaatgctc
ttcgaccaggaccgtgtggaccgtacactcgtcaaagtggtcccacaaggcaactgccgt
cgagtgagtgtcaacagcatgctccacgagtacctggtgaaccacctccccatggctacc
aacaatgacaccagcgagtacacaatgctggcacctcttgacccactgggacacaactac
ggcatctacacagtcaccgaccaagacccaaggatcgccaaggaaattgccctgggcagg
tgtttcgacggcacatctgatggcacctccagaaccatgaagagcgacgtcggtgttggg
ttgactttcacttgttcggaaaggagcgcaacagagcaaagtatcttccagtctcagagg
aacttgggccagcaatctccaaggaactcaggccagcagtccatcctggttctgccaggg
cagagccccgtgtaccagaggccaccagcaagccgccgaaacaaccaagccaggatcccg
atgagaggtcaacgtcccacctactag
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