Corvus cornix (hooded crow): 104683978
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Entry
104683978 CDS
T03546
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04137
Mitophagy - animal
ccw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104683978 (USP8)
04137 Mitophagy - animal
104683978 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104683978 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104683978 (USP8)
04121 Ubiquitin system [BR:
ccw04121
]
104683978 (USP8)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104683978 (USP8)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104683978 (USP8)
Membrane trafficking [BR:
ccw04131
]
Endosome - Lysosome transport
Others
Others
104683978 (USP8)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104683978 (USP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
104683978
NCBI-ProteinID:
XP_010389428
LinkDB
All DBs
Position
10:complement(3000546..3039163)
Genome browser
AA seq
1129 aa
AA seq
DB search
MPAVASVPKELYLSTSLKDLNKKTEVKPEKTSTKSYVQSALKIFKAAEESRLDGDEEKAY
ILYMKYAAVYNLIRKRPDFKQQQDYFHSILGPTNLKKALDEAEILSDSLKLRYEEAEVRK
KLEERDRQELQKKQEPKDDGKSSAKNSSESAVDSKGKSQRINGETKHSLERKDQSDSLSG
AVTPEKLFAMMSDRNTELLIMDARRLKDYQESCIPKSISVPEEAIHPGDTANLIEARLPE
DSRDPWKRRGQFHYVILLDWFSTAEDLKLGTTLQSLKDALFKWESKTILQNEPLILEGGY
ENWLLCFPQYTTNARVTPPQHGRTEAVTVSLDFTYPSLEEPAPVPPVVAVKPCPTETIEN
EEMGDNLEERLKSLNKPNIQDAAVPKSDSSFVVNPVLSTRSIPEVDRTKKPSLKILDDNR
AKPPSTVSDSQSGENGRIVPDRSTKPVRDARSALTEEEKSRVHAETAALLEKNRREKELR
ERQQQEQKERLKREKEEQERKEKEKQEQKAKEEQKEKEHKEKLQQSKEDREQKERDEQIK
REQEEKEQERAHREAVEAKKQNKNEPENIGAKRIEFDKISMEEREKGTRTPETQKRALGD
ASQTFVTVPGKQTGVKGQPDSGAQKPGPLREDSEQDTETLKSQREPLMRARSEEMGRIVP
GLPAGWVKFLDDITGTYRYYHSPTNTVQMYPPEMAPSSTPPSTPPTRKAKPKVTVERERE
HSKLKRSYSSPDITQAIQEEEKKRIPVTPAVNRDNKPACYTKAEISRLSASQIRNLNPVF
GGSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSNFLGHKGEVAEE
FGVIMKALWAGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADN
RKRYKEENNDHLDDSSAAEIAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKRSRTFEAF
MYLSLPLASSSKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSSKKIEIWKLPPVLLV
HLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKTSLKRYNLFSVSNHYGGLDGGHYT
AYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYTSYEQRAVDMAT
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtggcatctgtacctaaggagctatatctctctacttccttgaaagatctc
aacaagaagacagaagtaaaacctgaaaagacaagtacaaaaagttatgtgcagagtgcc
cttaagattttcaaggcagcagaggaaagcagattggacggagatgaagaaaaagcttac
atcctgtatatgaaatatgcagctgtctataaccttattagaaagagacctgattttaag
cagcaacaggattattttcattcaattctgggacctacaaatttaaaaaaagctcttgat
gaagctgaaattctgtcagacagccttaaactcagatatgaggaagctgaagttcggaaa
aaacttgaagagagggacagacaagagctgcagaaaaagcaagaaccaaaagatgatgga
aagagctcagccaaaaactcctcagaaagtgctgtggattccaaaggaaaaagccaaagg
attaatggtgagacgaagcattcactggaaagaaaggatcagtctgatagcctgagtgga
gcagtcacacctgagaaactgtttgcaatgatgtcagacagaaatactgaattgcttata
atggatgctcgaagattgaaggattatcaggaatcctgtattccaaaatccatcagcgtc
ccagaagaagctatccatcctggagatactgctaatctgattgaagctagactcccagag
gattctagagatccatggaagaggagaggacagtttcattatgttatactgctagactgg
tttagtactgctgaagacttaaagctgggaacaactcttcagagcctgaaagatgcactt
tttaagtgggaaagcaaaaccatactgcagaatgagcctttaattctagagggaggttat
gaaaactggctcctttgttttccccagtatacaacaaatgctagagtaactccaccccaa
catggcaggactgaagcagtgactgtttctttggattttacatatccatctctggaagag
ccagctcctgtgccacctgttgttgctgtaaagccatgtccaacagaaacaattgaaaat
gaagaaatgggagataatttggaagagagattaaaatcacttaataaaccaaacatacag
gatgctgctgttcccaaatctgacagttcatttgtagttaatccagtgttgagcacaaga
agtatccctgaggtggatcgtactaaaaagccttcactaaaaatccttgatgataacaga
gcaaagcctccaagtacagtcagtgacagccagtctggtgagaatggaagaatagttcca
gaccgctccacaaagcccgtgcgtgatgcaaggagtgctctgacagaagaagaaaaaagc
cgggtccatgcggaaactgctgctttgttggagaaaaacaggagggaaaaggaactgcgg
gagaggcaacaacaggaacagaaagagaggctcaagagagaaaaagaggaacaagaacga
aaagaaaaagaaaaacaagaacaaaaagcaaaagaagaacagaaggaaaaggaacacaaa
gaaaagctacagcaatccaaagaggacagagagcagaaggagagggatgaacaaataaaa
agagaacaggaggaaaaagaacaagaaagagcacacagagaagcagtagaagcaaaaaag
cagaataaaaatgaaccagaaaacattggtgcaaaaaggattgagtttgacaaaatatcc
atggaagaaagagaaaagggaactcgaacaccagaaacacagaaacgggcactgggtgat
gcatctcagacctttgtgactgttccaggcaagcaaacgggggttaaaggacaaccagac
agtggagctcaaaagccaggaccccttagagaggattctgaacaagatactgaaacactt
aaatcccagcgggagccattaatgagagcacgaagtgaggaaatgggaaggatagtccca
gggctgcctgcaggttgggtaaagttcctggatgatatcactggaacctatcgttactat
cactcgccaacgaacactgttcagatgtacccaccagaaatggctccttcgtccactcct
ccatcaacccctccaactcggaaagccaagccaaaggtgactgttgaacgggagagagaa
cactccaagctgaagcgctcctactcttccccagatataacccaagccattcaggaggaa
gagaagaaaagaattcctgtcactcctgcagtcaatcgtgacaataaacctgcctgttac
actaaagcagaaatttccagactctctgcatcacagattcggaatcttaatcctgtgttt
gggggatcaggaccagctctgacaggacttcgtaatctagggaacacttgctacatgaat
tccatattacagtgtctgtgcaatgcacctcacctggctgagtatttcaacaggaacttg
tatcaagctgatattaacaggtcaaatttcctggggcataaaggtgaagtggctgaagag
tttggtgtaataatgaaagctttatgggcaggacagtataaatatatcagtccaaaagac
ttcaaaattacaattgggaagattaatgaccaatttgcaggatatagccaacaggactcc
caagaactgcttctctttctaatggatggcttgcatgaagacctaaataaagctgacaac
aggaaaagatacaaggaagaaaataatgatcaccttgacgactcgagtgcagcagaaata
gcctggcacaaacacaaacagctcaacgagtccattattgtggcactcttccaaggccag
ttcaaatccaccgtgcagtgtctgacgtgtcacaagaggtcccgaaccttcgaggctttc
atgtatctgtcattaccacttgcctcctccagcaaatgtactctgcaggaatgccttaga
ttgttctccaaagaagaaaagctcactgataacaacagattttactgtagccattgcaaa
actcgaagggattcttcaaaaaaaatagaaatttggaaattaccacctgttcttcttgtg
cacttgaaacgcttttcctatgatggaagatggaaacaaaagcttcaaacttctgtagat
tttccattggaaactcttgacctgtcacagtatgttattggtccaaagacttccttgaag
agatacaatctgttctcagtatcgaatcattacggtgggctggacggggggcactacaca
gcctactgcaaaaatgcttcaaaacagcgctggtttaagtttgatgaccatgaagtgtct
gagatctcagcatcctcggtgaagtcctcagctgcttacattctcttttatacttcctat
gaacagcgagcagtggatatggccacgtaa
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integrated database retrieval system
