Corvus cornix (hooded crow): 104684126 Help Entry 104684126         CDS       T03546                                  Symbol DDB1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism ccw  Corvus cornix (hooded crow) Pathway ccw03420   Nucleotide excision repair ccw04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ccw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104684126 (DDB1)   09124 Replication and repair    03420 Nucleotide excision repair     104684126 (DDB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ccw04121]     104684126 (DDB1)    03400 DNA repair and recombination proteins [BR:ccw03400]     104684126 (DDB1) Ubiquitin system [BR:ccw04121]  Ubiquitin ligases (E3)   Multi subunit Ring-finger type E3    Cul4 complex     Adoptor protein      104684126 (DDB1) DNA repair and recombination proteins [BR:ccw03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       104684126 (DDB1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       104684126 (DDB1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MMS1_N CPSF_A Motif Other DBs NCBI-GeneID:  104684126 NCBI-ProteinID:  XP_039409347 LinkDB All DBs Position 5:58813299..58825215 Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRE TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcctacaactacgtggtgacggcgcagaagccgacggccgtcaatggctgcgtcacc ggacacttcacctctgcggaggacctgaacctgctgattgccaagaacacccggctggag atttatgtcgtgacggccgaggggctccggcccgtcaaggaagtggggatgtacggaaaa accgccgtcatggagctcttccgccccaagggggagagcaaggatttgctgttcatcctg acagccaagtacaatgcctgcatcctggaatacaagcagaacggggatagcatcgacatc atcacccgtgcccatgggaacgtgcaggatcgcattggccgcccctcggagaccgggatc atcgggatcatcgatcccgagtgccggatgatcgggctgcggctctatgacggccttttc aaggtcatccccctggatcgggagaacaaggaattaaaggccttcaacatccgcctggaa gagctccaggtcatcgacgtgaaattcctttacggctgccaagctcccaccatctgcttc gtctaccaggacccccagggccgccacgtgaagacatacgaggtgtccctgcgggagaag gagttcaacaaaggcccttggaagcaggagaacgtggaggccgaagcctccatggtcatc gcagtgccggagccctttggaggtgccatcatcatcgggcaggaatccatcacctaccac aacggcgataaatacctggctatcgctcctcccatcatcaagcaaagcaccatcgtgtgc cacaaccgcgtggatcccaacggatcccggtatttgctgggagacatggaagggcggctc ttcatgctgctcctggagaaggaggagcagatggacggcactgtcaccttgaaggacctg cgtgtggagctgctgggagagacatccattgccgagtgcctgacctacctggataacggc gtggtgttcgttggctccaggctcggagattcccagctcgtgaagctcaacgtggacagc aacgagcagggatcctacgtggtggccatggagaccttcaccaacctcgggcccatcgtg gacatgtgtgtggtggacctggagaggcaaggccaaggccagctggtcacctgctccggg gccttcaaagagggatcgctgcggatcatccgcaacggcattgggatccacgagcacgcc agcatcgacctgccaggaattaaagggttgtggccgctgaggtcggatccgcaccgggag acagacaacaccttggtgctgtcctttgttggccagaccagggttctgatgttgaacgga gaggaagtggaagagacggagctcacgggatttgtggatgaccagcagacgtttttctgc ggcaatgtggcgcatcagcagctgatccagatcacctctgcctcagtgcgactggtcagc caggagcccaaatccctggtgagcgagtggaaagagcccaacgggaagaacatcagcgtc gcctcctgcaacagcaaccaggtggtggtggccgtgggaagggccttgtactacctggaa atccggccccaggagctccggcagatcagctgcacggagatggagcacgaggtggcctgc ctggacatcacccccctgggagactccaacgggatgtccccgctctgcgccatcgggctc tggaccgacatctccgcccgcatcctgaagctcccgtccttcgagctgctgcacaaggag atgctgggaggagagattatccctcgctccatcctgatgaccaccttcgagagcagccac tacctcctgtgtgccctgggggacggagctctcttctacttcggcctcagccttgagaca ggcttgctgagtgacaggaagaaggtgaccctggggacacagcccaccgtgctgaggaca ttccgctccttgtccaccaccaacgtgttcgcctgctccgaccgccccaccgtcatctac agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc cccctcaattccgacggatatcccgacagtttggccttggccaacaacagcaccctgacc atcggcaccattgatgagatccagaagctgcacatccgcactgttcccctctacgagtcg cccaggaaaatctgctaccaagaggtatcccagtgtttcggggtgctctccagccggatc gaggtgcaggatgccagcgggggcaccacggcgctcagacccagcgccagcacccaggcc ttgtccagcagcgtgagcaccagcaagctgttttccagcagcacggctccgcacgagaca tccttcggagaggaggtggaagtgcacaacctgctcatcatagaccagcacaccttcgaa gtgctccatgctcaccaattcctgcaaaatgagtatgccctcagcctggtctcctgcaag ctggggaaggatcccaacacctacttcatcgtgggcactgccatggtgtatcccgaggaa gcggagcccaagcagggccggatcgtcgtcttccactactccgatgggaagctgcagagc ctggctgagaaggaggtcaagggagctgtgtattccatggtggaattcaatgggaagctg ttagccagcatcaacagcacggtccgcctgtacgagtggacagcggagaaggaattgcgc acggaatgcaaccactacaacaacatcatggccctgtacctgaaaaccaagggggatttc atcctggtgggagacctcatgcgctccgtgctgctcctggcctacaaacccatggaaggg aatttcgaggagattgcccgggatttcaatccaaactggatgagcgctgtggagatcctg gatgatgataatttcttgggagcggagaacgctttcaatctgttcgtgtgccagaaggac agcgcggccacgacggacgaggagcggcagcacctgcaggaagtgggattatcccacctg ggagagttcgtcaatgtcttctgccacggatccctggtcatgcagaacctgggagagact tccacgcccacccagggatccgtgctcttcggcaccgtcaatggaatgatcggcctggtg acatccctgtcggaaagctggtacaacctgctcctggacatgcagaataggctcaacaaa gtcatcaagagcgtggggaagattgagcattccttctggagatcgttccacaccgaacgg aagacggaaccggccacgggattcatcgacggggacctgatcgagagtttcctggacatc agcaggcccaagatgcaggaagtggtggcaaacctgcagatcgacgatggaagcgggatg aagagggaagccaccgtggatgacctgataaagatcgtagaggagctgacccggatccat tag

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