Corvus cornix (hooded crow): 104684172
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Entry
104684172 CDS
T03546
Symbol
DCP2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104684172 (DCP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104684172 (DCP2)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
104684172 (DCP2)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104684172 (DCP2)
mRNA degradation factors
5'-3' decay
Decapping complex
104684172 (DCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
104684172
NCBI-ProteinID:
XP_039423550
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Position
Z:complement(67168292..67189659)
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AA seq
417 aa
AA seq
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METKRAEIPSSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFNHCPFLLPQGEDVQKVLVEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKEDYIELRINDQLARLYIIPGV
PKNTKFYPKTRREIRNIEWFSIDKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLREWIS
RRNGDSSDSDNGFSSAGSTPSKPNLEKARSKLRCSQQVFTDGFSGEQWVKPKQPQKPYNH
PEVSEVLKIKSQSLRNNGRKQSQDASSQKKRTNGLHSQPVKQNHTLKCEKRLNPRRLQDN
FETEAAYEMCCSSEDPLPEHVEGHSMACNGHYKFAFSSRAFLSFKFDHDAIMKSFDL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacgggccgagatccccagcagcgtcctggacgacctatgcagccgattt
attttgcacattccaagtgaagagagagacaatgcaatcagagtgtgttttcagattgaa
cttgcccattggttttatttggatttctacatgcaaaacacaccaggattacctcagtgt
gggataagagacttcgctaaagctgtcttcaatcattgcccttttttactgcctcaaggt
gaagatgtacagaaggttttagttgagtggaaagaatacaaaatgggagtgccaacctat
ggtgcaattattcttgatgagacacttgaaaatgttcttttggttcagggctatttagca
aaatctggttggggatttccaaaagggaaagtaaataaagaagaagcacctcatgactgt
gctgctagagaggtgtttgaagaaactgggtttgacataaaagattatatctgcaaagag
gactacattgagctgcgaattaatgatcagttagcacggctgtacatcattccaggagtt
cccaagaacacgaaattctaccccaaaactagaagggaaattcggaatattgagtggttt
tccatcgacaaattaccatgccatagaaatgacatgaccccaaaatccaagctgggtttg
gcacctaacaaattttttatggcaattcccttcatcaggccattgagggagtggatttcc
cgaaggaatggagactcctcagacagtgacaatggcttttcatctgcagggagcacaccc
tctaagcccaacttggaaaaagctagatccaaacttcgctgtagtcaacaggtgtttaca
gatggcttttcaggagagcagtgggtgaagccaaaacagccacagaagccatacaatcat
cctgaggtgtctgaagttttgaaaataaagagtcagagcctgaggaacaatggcagaaag
caaagtcaagacgcttccagccaaaagaagcgaacaaatggactgcacagtcaaccagtt
aagcaaaaccataccttgaaatgtgaaaaaaggcttaatccaagaagacttcaagataac
tttgaaacagaagcagcatatgagatgtgttgctccagtgaagacccactgccagaacat
gtagagggacattctatggcatgcaatggccattacaaatttgctttttcatcaagagct
ttcttgagtttcaagtttgaccatgatgccataatgaaaagttttgacctctga
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