Corvus cornix (hooded crow): 104684212
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Entry
104684212 CDS
T03546
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104684212 (SCRIB)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
104684212
NCBI-ProteinID:
XP_039404756
LinkDB
All DBs
Position
2:complement(153981293..154078548)
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AA seq
1980 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDVTESIGDCENLSELILTEN
MLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLNVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKGDDDEESGAERRGLQRRATPHPSEL
KVMKKVIEVRRNEVNAAKADVNPNSPNSEEKRLSATSNRSEDSHLSTSTVSADCRAEERD
RGWPNGQVPDARELEKEVKPRVEEERKEAADQEEEDVEVEYNEPTVHFAEDTLIRSEDED
EDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEELGGCN
NNTEPEDQEEAWDEDDRKNAALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTG
GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAEHHVA
VEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPERPEGAPATE
RFSTCLMRNEKGLGFSIAGGKGSTPYRAGDMGIFISRIAEGGAAHRDGILHVGDRVISIN
GVDMTEARHDQAVALLTAASPTIVLLVEREGAEQPGEGDSPGAPRVRMHSPPPPPGPGDS
PPEETPAPQRNHLSKGLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVFIS
KVIPRGLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNAQELTMVVRRDPPPPGMQ
EICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGMRILE
VNHQSLLGMTHTEAVQILRGVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGRKN
SLESISSIDRDLSPEEVEILQKEMEMVREATQWEREEMEKVERMRREREAATQQLEEEAE
NIPSEPLRLDYRTLAALPSSGLQRGNRGPVQCAKPSSSMEGDCAVLSLPTAWDSREVSPD
PAAGATRPLRHPTPPHQHTSGAEQPRGDKQDPVGCPLSQEQLPETPECLIDSQPIPFSEN
PFVVANRRGKATGTAGLGGPPLGYGRGGVLKTSLYSKAPVGESGTGNSRRETPYSPSNPQ
VPAAPRPPHLAGRETRFASINFITSQDDSKSTKPGVIQPLSRVRQSGASHSAEEGDSPNP
FQQPEPCFRIHSSQKPSPPSPPSPDEVPINVKQAYKTFAAVPLSHPLLGTQELSGQSSTE
NTKMALEMATHSPGGQHSPEQRSFRERQKYFEIEVKQQHLDKPPKRVSLVGEDDLKKMKE
EEARKLQQQRALLLEEEAEEDEEVRQVPEAVQSSIIIEGVEYKVERLNGRSIQAPAARPL
EHGENSSSQRNSLEEGIKSEQRTNSMSGLSPSLVGMADPGAPVRTAKAERRHQERLRMQS
PELLSGQEKELSPAERRALEAEKRAMWRAARSSALEDSIKQYEQDLARKLYQSRQWAPAT
GARPAQMSSPVQSHASRIPGSGGQSRMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAESP
SPAPTPSPTPLEDCSPRNVTSPGRLSMSEKKFDYREFAAIPSSKPVYEIQSPDAADDLRY
VDDRNNSVPREQDGQPEEEDALGTRDPSAPTPSALEDMALYSSKRKLRHSRRSLETAVPT
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctcgttgcaggccgtgcccgaggagatctaccgctacagccgctcgctcgaa
gagctgctgctggacgccaatcagctccgcgagctgcccaagccttttttccggcttctg
aacctgcgcaagctgggcctgagtgacaatgagatccagaggcttccccctgaggtggcc
aacttcatgcagctggtggagctggacatctcccgcaatgacattccagaaattcctgaa
agcatcaaattctgcaaatccctggaaatcgcagacttcagtgggaatcctctctccagg
cttcctgagggcttcacccagctccgaagcctgggccacttggccttgaacgatgtgtcc
ctgcagagcctccccactgacattgggaatttggcaaacctggtgactttggagctacgt
gagaacctgctaaagactctccccacttcactctccttccttgtcaagttagagcagttg
gatctcggtggcaatgacctggaagtactgccggacactctgggtgctctcccaaacctg
cgcgagctctggctggaccggaaccagctctcggccctgccgccggagctgggcaacctc
cgccgcctggtctgtctggatgtgtctgagaacaagctggagcagttgcccaacgaggtc
agtgggctggtggcactgacagacttgctgctgtcacagaacctgctggaatgcattccg
gatgggatcggtcagctgaagcagctctccatcctcaaggtggaccagaaccggctgaca
gatgtgacagaatcaattggggactgtgaaaatctgtctgagctcatcctgactgagaac
atgctgacggccttgcccaagtccctgggcaagctggccaagctgacaaacctgaacgtg
gaccggaaccggctgacggcgctgccagcagagattggaggctgtgccaacctcaatgtc
ctgtccttgcgggacaaccgcctggccctgctgccccccgagctggccaacaccactgag
ctccatgtcctggatgtggctgggaacaggctgcagaatttgccctttgctttaacaaat
cttaatctgaaagccctgtggctggcagaaaaccagtcccagcccatgctgaaattccag
accgaggatgatgaaaagacaggagaaaaggttctcacttgctacctgctcccccagcag
ccctctcccagcctggagaacctcctgcagaacagcgtggatgagagctggacagacacc
aacttaaacagagtcagcgtgatccagttcctggatgaacctaaaggagatgatgacgag
gagtctggcgctgagagacgaggcctgcagcgccgagccacccctcaccctagtgagctg
aaggtgatgaagaaggtgattgaagttcggcgcaatgaggtgaacgctgcaaaggctgat
gtcaacccgaactctcccaactcggaagagaagaggctaagtgccacatcaaatcgcagc
gaggactcccacctgtccaccagcaccgtctctgcggactgcagggcagaggagagggac
cggggctggcccaacgggcaggtgcccgatgcgcgggagttggagaaggaggtgaagccc
agagtggaagaggagcgcaaggaagctgctgaccaggaggaggaagatgtggaagtggaa
tacaatgagccgaccgtacacttcgctgaggacacactgatacggagtgaggatgaggat
gaggatgaagagcgaccgttcccagtggagaaacagaggcttattcgcaaggacacgccc
cactataagaaacacttcaagatcactaaactgcccaagccagaggcagtggtggcactt
ctgcaggggctgaacagcgatggggtccccaaagaggaagaggagttgggaggctgcaat
aataacacagagcctgaggatcaggaggaagcatgggatgaggatgacagaaagaatgca
gctttgtctgctcagccatctgtgaagggggtgtcgtttgatcaagccaataatctgctg
attgaacctgctcgcattgaggaggaagagctgacactgaccatcgtgcggcagacgggg
gggctgggcatcagcatcgcggggggcaagggctccaccccctataagggggatgatgag
ggcatctttatttcccgtgtgtctgaagagggtcctgcagctcgcgcaggggtccgtgtt
ggtgacaagcttctagaggtgaacggcgtgtccctgcactgtgctgagcaccacgtggcc
gtggaagcgctgcgggggtcgggaagctccgtctccatgacggtgctgcgggagcggatg
gtggagccagagaatgccatcaccgtcactcccctgcgccccgaggacgactacagccca
cgggagcggcgtggggggctgcgcttccccgagcgtcccgagggagcacctgccaccgaa
agattctccacctgcctcatgcgcaacgagaagggcctcggcttcagcattgctggtggc
aagggctccactccttaccgggctggggacatggggatcttcatctcccggatcgcagag
ggtggtgcagcccaccgggatgggatcctgcacgttggagaccgggtcatctcgatcaat
ggggtagacatgacagaagccaggcatgatcaggccgtagcgctgcttaccgcggcctcc
cccaccatcgtgctgctggtagagagagagggcgcggagcagcccggcgagggagactcg
cccggcgcgccccgcgtgcgcatgcactcccccccgccgccccccggtcccggggacagc
ccgcccgaggagacacctgcgccgcagaggaaccacctctccaaagggctggaggatcag
taccctatcgaggaaattcacctggtgaaagcaggtggtcccctgggcctcagcatcgtc
ggaggcagtgaccattccagtcatccctttgggattcatgagccgggtgtcttcatctcc
aaggtcattccccgggggctggcgtcgcgcagcgggctccgcgtcggggacaggattctg
gaggtgaacagcatcgacctgcgccatgccacccaccaggaagccgtgaatgcgctgctc
tccaacgctcaggagctcaccatggtggtccggagagacccacctccacctgggatgcag
gaaatatgcattgaaaaggctccaggagagaagctgggcatcagcatccggggtggagca
aagggccatgctggcaatccgtttgatcccactgatgaaggcatcttcatctccaaggtg
agctcctctggggctgcagcccgggatggccgcctgaaggtagggatgcggatcctggag
gtgaatcaccagagcctgctgggaatgacgcacacggaagccgtgcagatcctccgcggt
gtgggcgacgcgctcctcgtgttggtgtgtgatggctttgaccccaaggctgcggctgcc
atcgagatgtccccaggaatcattgcaaacccttttgctgctggcattgggcgcaagaac
agcctggagagtatctcctccatcgaccgggatctgagccccgaggaggtggagatcctt
cagaaggagatggaaatggtgagagaagccactcagtgggagagagaagaaatggagaaa
gtggagcggatgcgtagggagcgggaggcagccacgcagcagcttgaggaggaagcggag
aacatccccagtgaacccctgcgcttggactaccggaccctggcagcactgcccagcagt
ggcctgcagagaggcaaccgtggccctgttcagtgtgctaagcccagctccagcatggag
ggtgactgcgcggtgctgtccctgcccacggcatgggacagccgggaagtgtccccggac
ccagcggcaggcgcaaccaggcccctccggcaccccacgcctccccaccagcacacgagc
ggggcagaacagccccggggagacaagcaggaccccgtggggtgtcccttgtcccaggag
cagctgccagagacgccagagtgtttgatcgactcgcagcccatccccttcagtgagaac
ccctttgtggtggccaaccgcaggggcaaggccacaggcacggctggcctgggggggccc
cccctgggctatggcagggggggtgtgctgaagaccagcctgtactccaaggctcctgtg
ggcgagtctgggacaggaaattccaggcgtgaaaccccctattctcccagtaatccacag
gtgcccgcagccccccggcctcctcacctggccggcagggagacgcgctttgcttccatt
aacttcattacctcgcaggatgacagtaaatcaaccaagcctggcgtcattcagcctctc
tcccgcgtgcgacaaagtggtgcctcacacagtgcggaggagggggacagccccaacccc
ttccagcagcccgagccatgcttcaggatccacagctctcaaaaaccatcgccaccgtcg
ccaccctcccccgacgaggtccccatcaatgtcaagcaggcctacaagaccttcgcagcc
gtgcccctgtcccacccactgctcgggacacaggaattgtctggtcagagcagcacagaa
aacaccaaaatggccttggagatggccacacacagccctgggggacagcacagccctgag
caaaggtccttccgtgagaggcagaagtattttgagattgaggtgaagcagcagcacctg
gacaagcctcccaagcgtgtgtccttggtgggggaggatgacctgaagaaaatgaaagag
gaggaagcccgcaagctgcagcagcagcgagcccttctgctggaggaggaagccgaggag
gatgaggaggtgaggcaggtgcctgaggctgtgcagtccagcatcatcatcgagggcgtc
gagtacaaggtcgagaggctgaacggaaggagcatccaggctccagcagctcggcccttg
gagcacggtgagaacagcagctcacagaggaattccctggaagaggggatcaagtctgag
cagagaaccaactccatgtcagggctgagcccgtcgctcgtgggcatggcggatcccggg
gccccagtgcggacggccaaggctgagcggcggcaccaggagcggctgcggatgcagagc
ccagagctgctgagcgggcaggagaaggagctgtctccagcagaacgccgggctctggaa
gcagagaaacgggccatgtggagggcagcacgatcctcagctcttgaagacagtattaaa
cagtacgagcaggatctggccaggaagctgtaccagtcccggcagtgggcacctgctact
ggggccaggccagctcagatgtctagcccagtgcagagtcacgcctcaagaatccctggg
tcaggaggccaatccaggatgaaatcactggaacaggatgctcttaaagcccaaatggtt
attgccaagtccaaggaggggaagaaacgcagcacgctggagcagctggcagagtcacca
tcgcccgctccgacgccatctccaacgccactggaagattgcagccccaggaacgtcact
tccccaggaaggctgtcaatgtctgaaaagaagtttgactaccgggaatttgctgctatt
ccttcctccaaacctgtttacgaaatccagtcgcctgatgcagctgatgacctcagatac
gtcgatgaccgaaataactcagttccccgggagcaggatgggcagccagaggaagaggat
gcattaggaacacgggatccatcagcaccaactccctcagcgctggaggacatggccctg
tacagcagcaagcggaagctccgacacagccggcgcagtttggagaccgctgtccccaca
tag
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integrated database retrieval system
