Corvus cornix (hooded crow): 104684397
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Entry
104684397 CDS
T03546
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104684397 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104684397 (HNRNPU)
Spliceosome [BR:
ccw03041
]
Common components
Common spliceosomal components
hnRNP proteins
104684397 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
SAP_new25
Motif
Other DBs
NCBI-GeneID:
104684397
NCBI-ProteinID:
XP_039424904
LinkDB
All DBs
Position
3:complement(32820022..32834782)
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AA seq
840 aa
AA seq
DB search
MSCSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDQEEAGGGGPASGAAEPG
NGSVEGEAAESGGGAAQLRQGGGPGQAAASAMEDDDEEGLEAADGDAMELGEENGERAGA
GGGPMEEEAGGEEEEEEEEEDENGDDQGFQEGEDELADEEEAAAGDANGHGDQQAPQPQQ
PQQPPPLLPPRSAAAAKEAPGKSAGGASGPAAASGPAGPAKQQQQQQKKAEGGGGGGRPG
AQGAGDGKTEQKPGEKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDT
VVCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPV
KHLYTKDIDIHEVRVGWSLNTSGMLLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI
GCFANFDGDEVELSYSKNGQELGVAFKISKEVLDGRPLFPHVLCHNCAVEFNFGQKEEPY
FPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTTWVTKHAAANPGKYN
ILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSA
AAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVA
ECFDEIIYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKNKKSNKNQFNRGQRGRG
GFNMRGNFRGGVPGNRGGYNRRGGNMPQRGGGGGGGGGGSSGAIGYPYPRGPVFPSRGGY
SNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctcgcccgtgaacgtgaagaagctgaaggtgtcggagctgaaggaggagctg
aaaaagcggcgcctctccgacaagggcctcaaggctgagctcatggagcggctccaggcc
gcgctagaccaggaggaggccggcgggggcggccccgccagcggcgcggccgagcccggc
aacggcagcgtggagggggaggcggccgagagcggcgggggcgccgcgcagctccgccag
gggggaggccccggccaggccgcggcctccgccatggaggacgacgacgaggaagggctg
gaggccgccgatggcgacgccatggagctgggcgaggagaacggcgagcgggcgggggcc
gggggcggccccatggaggaggaggcgggcggcgaggaggaggaagaggaggaggaggag
gatgagaacggcgacgaccagggtttccaagagggggaggacgagttggccgacgaggag
gaggccgcggctggggacgccaacgggcacggtgaccaacaggcgccgcagccccagcag
ccgcagcagcccccgccgcttctcccgccgcgcagcgccgccgccgccaaggaggctccc
ggcaagagcgctgggggcgcctcggggcccgccgccgcctccggcccggcgggccccgct
aagcagcagcagcagcagcagaagaaagcggaaggcggcggcggaggcggccgccccggg
gcgcagggcgctggggatggtaaaaccgaacaaaaacctggcgagaagaagaggggagtg
aagagaccacgtgaagaccatggccgtggatacttcgaatacattgaggaaaacaagtat
agcagggccaagtcccctcagccacccgttgaagaggaagatgaacattttgacgacaca
gtggtttgtcttgacacttataactgtgacctgcattttaaaatctcaagagaccggttt
agtgcttcctctctgaccatggaaagctttgctttcctttgggctggaggaagagcctcc
tatggagtttctaaaggcaaagtctgctttgagatgaaggttacagaaaagattcctgtt
aaacacctgtatacaaaagacattgacatacatgaagtgcgagttggctggtcactgaac
acaagtggaatgttgcttggtgaagaagaattttcttatgggtattctctaaaaggaata
aagacatgcaattgtgagactgaagactttggtgagaagtttgatgaaaatgatgtgatt
ggatgttttgctaattttgatggtgatgaagtggaactctcatattccaagaatggacaa
gagcttggtgttgcattcaaaataagcaaggaagttcttgatgggcgaccactctttcca
catgttctctgccataactgtgcggttgagtttaactttggtcagaaggaggaaccttac
ttccctgtacctgaagagtataccttcatccagaaggtccccctggaggatagggtccga
ggaccaaaggggcccgagcaaaagaaagattgtgaggtggtgatgatgattggcttgcct
ggagctggcaagacaacatgggttaccaaacatgcagcagcaaatcctgggaaatacaac
attcttgggacaaatactattatggacaaaatgatggttgcaggttttaagcgtcagatg
gcagacactggaaagcttaacacactgttgcagagagctccacagtgtcttggaaagttc
attgagattgcagctcgtaagaagcggaatttcattttggatcagacaaatgtgtctgca
gctgcgcagaggagaaaaatgtgcctgtttgcaggcttccagcgcaaagcagttgttgtt
tgccctaaagatgaagactacaagcaaagaacacaaaagaaggcagaggtggagggaaaa
gatcttccagagcatgcagttctcaaaatgaaagggaacttcacactgccagaggtagca
gaatgttttgatgaaataatctatgtagagttgcaaaaagaggaagctcagaagcttttg
gaacagtataaagaagaaagtaagaaagctcttccgccagaaaagaaacagaacactggc
tcaaagaagaacaagaagagcaataaaaatcaatttaataggggtcagagaggacgtgga
ggattcaacatgcggggcaacttcagaggaggagtccctggcaatcgtggtggatacaac
aggaggggaggcaacatgcctcagcgaggcggtggaggtggcggtggtggcggtggcagc
agcggagcaattggctacccgtatcctcgcggccctgtctttccaagcagaggtggctac
tcaaacagaggaaactataacagaggtggaatgcccaacaggggaaactacaaccagaac
ttcagaggaaggggaaataatcgtggctacaaaaaccaatctcagggctacaaccagtgg
cagcagggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattat
tga
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