Corvus cornix (hooded crow): 104684536
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Entry
104684536 CDS
T03546
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104684536 (SCFD1)
Membrane trafficking [BR:
ccw04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
104684536 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104684536 (SCFD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
104684536
NCBI-ProteinID:
XP_039408401
LinkDB
All DBs
Position
5:complement(27453453..27505964)
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AA seq
632 aa
AA seq
DB search
MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESTGMESTPAGARPK
KKNKKSYDLTASDKFWQKHKGSPFPEVAESVQEELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALVDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNTTPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKSKQSKHVLYGCSELFNATQFMKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctcctgttaaaaacagcacaggagaaccagtgtggaaggttctcatttatgacaga
tttggccaagatatcatctcacctttgctgtcagtgaaagagctaagagatatggggatc
actttgcatctgcttttgcattcagatcgggatgctattccagatgttccagctgtttac
tttgtaatgccaacagaagaaaatattgaccgaatgtgccaggatcttcgaaaccagctt
tatgaatcttactatttaaacttcatttctgccatttcgagaagtaaactggaagatatt
gcaaatgctgctataggtgctaatgcagtaactcaagtggctaaggtgtttgatcaatat
cttaattttattactttagaagatgatatgtttgtattgtgtaaccaaaacaaagaactt
gtttcatatcgtgccattaaccgaccagatataacagacacagaaatggaaactataatg
gacactattgttgatagtctcttctgtttttttgttacacttggcgctattcctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaattggataagaagctcaga
gagaatctaagagatgccagaaacagtctttttacaggtgacacacttggagctggccag
ttcagcttccaaaggcccctattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacttggacataccaagctttagttcatgatgttctggatttccatttgaat
agagttaacttggaagaatcaacaggaatggaaagtactccagcaggtgctagacctaag
aaaaaaaataagaagtcctatgatttaactgcatctgataaattttggcaaaagcataag
ggcagtccttttccagaggtggctgagtctgttcaggaagaactggaatcttacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggtatagaaggggaggatgaagga
gcaataagtatgctttcagataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcataccaatgttgcaacagccgttttg
gagcacataaagagtcgaaagctggatgtgtattttgaatatgaggaaaaaataatgagc
aaatccactctggataaatctcttctggacatgatttctgacccagatgcgggaactcca
gaagacaaaatgcgattatttctcatctattacataagctcagctcaggcaccttcagag
attgatttggagcagtacaaaaaagcattggtggatgcaggttgtaatctcgctcctttg
agctacataaaacaatggaaggctttcactaagatggcttcagctccaaccagctacgga
aacactacacctaaacctttgggtctgttttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacaaaatctgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaaccctgagacagatgactaccgatattttgac
cccaagatgctacgaggcagtgacagctcagttccaagaaataaaaatccattccaggag
gccatagtatttgtagttggaggaggcaactatattgaatatcaaaatcttattgactac
ataaagagtaaacaaagcaaacatgtcctgtatggctgcagtgaactttttaatgctaca
cagtttatgaaacagctatcccagcttggccagaaataa
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