Corvus cornix (hooded crow): 104684548
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Entry
104684548 CDS
T03546
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104684548 (SSRP1)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104684548 (SSRP1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104684548 (SSRP1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104684548 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
SSRP1_C
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104684548
NCBI-ProteinID:
XP_039408771
LinkDB
All DBs
Position
5:59360807..59366879
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AA seq
702 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRDEKKPAKKAKIVKDRKPRKKQPESKKGK
DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYSKADSHRGERSKKKKKKQEKQVKGKGDKKGATSKSSSSKSPAKGMSDS
FKSKEFVSSDESSSAESKKEDSEDEGAASPPPSSEDSASGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacgctggagttcaacgagatctaccaggaggtgaagggctccatgaacgat
gggcggctgcggctgagccggcagggcgtcatcttcaagaacagcaagacggggaaggtg
gacaacatccaggcctcggagctggccgagggcgtgtggcgacgcgtggcgctggggcac
ggcctcaagctgctcaccaagaacggccacgtctacaagtatgatgggttccgggagtcg
gaatttgacaagctctcagatttcttcaaggcccactattgcctggagctggcggagaag
gatctgtgtgtgaagggctggaactggggcacagtgaggtttggaggacagctgctgtcc
ttcgacatcggggagcagccggtgttcgagatcccgctcagcaacgtgtcccagtgcacc
acgggcaagaacgaggtgacgctggagttccaccagaacgacgatgccgaggtctcgctc
atggaggtccggttctacgtgccccccacccaggaggacggcgtggaccccgtggaggcc
ttcgcccagaacgtgctgtccaaggcggacgtgatccaggccaccggagacgccatctgc
atcttccgggagctgcagtgcctgacgccgcgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctcccgcacaaggaccagcgccagatgttcttcgtgatcagcctggac
cccccgataaagcaaggccagacccgctatcacttcctgatcctgctcttctccaaggat
gaggacatctccctgaccctcaacatgaatgaggaggaggtggagaagcgcttcgagggg
cggctcaccaagaacatgtcggggtccctctacgagatggtcagccgggtgatgaaggcg
ctggtgaaccgcaagatcaccgtgcccggaaacttccagggacactccggagcccagtgc
atcacctgctcctacaaggccagctcggggctgctgtacccgctggagaggggcttcatc
tacgtgcacaagccccccgtgcacatccgcttcgatgagatctccttcgtcaacttcgcc
cgcggcaccaccaccacgcgctccttcgacttcgagatcgagaccaagcagggcacccag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaatgcc
aagaagctgaacatcaagaaccgggggctgaaggagggaatgaagcagagctacgatgaa
tatgccgactctgacgaggaccagcatgatgcctacttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaacgacagcagtgacggctccggggaggagacagatgag
tccttcaaccctggagaagaggatgacgacgtggctgaagagttcgacagcaacgcctcg
gccagttcctccagcggcgacggcgacagcgaccgggacgagaagaaaccggccaagaag
gccaagatcgtcaaggaccgcaagccccgcaagaagcagccggagagcaagaaggggaag
gaccccaatgctcccaagcgcccgatgtcagcctacatgctctggctgaatgccagccgg
gagaagatcaagtcggaccaccctggcatcagcatcactgacctgtccaagaaggctggg
gagctctggaaggccatgtccaaggagaagaaggaggagtgggatcggaaggcggaagac
gccaggcgggactacgagaaggccatgaaggagtacagcaaggctgacagccacaggggg
gagaggtccaagaagaagaagaagaagcaggagaagcaggtgaaggggaaaggggacaag
aaaggtgccacctccaagtcctcgtcctccaagtccccggctaaaggcatgagtgacagc
ttcaagagcaaggagttcgtgtccagcgacgagagttcctctgcagagagcaagaaggag
gactcagaggacgagggcgctgccagcccgccccccagctccgaggactcggcgtccggc
tcggattag
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