Corvus cornix (hooded crow): 104684623
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Entry
104684623 CDS
T03546
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104684623 (CTR9)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104684623 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
104684623
NCBI-ProteinID:
XP_010390335
LinkDB
All DBs
Position
5:complement(54921770..54942061)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRCSARASD
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaggttccatcgagatcccgctccgggataccgacgaggttatcgagcttgac
ttcgatcagttgcccgagggtgatgaagttataagtatactcaaacaggaacacacccag
ctgcacatatggattgccctagcgctggaatactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaaa
gatcagatgacatgtctggacacactggcagcctactatgtacagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcattacccaggccaccctgctgtacaccatggct
gacaaaatcatcatgtatgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggtgataagatggaccaagccgatgcacaattccacttcgtgctcaaccagtctcca
aataatattcctgcccttcttggtaaggcatgcatttcttttaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagctgaggtt
cgactgggaatgggccactgcttcgtgaaactgaacaagctggaaaaagctcgcttggcc
ttcagcagggctctggagctgaattccaaatgcgtcggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccataacacagaa
gtggaagcgatgcaggcagagagctgttatcagctggcaaggtcttttcacgtgcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttc
gtacttccattttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagttttgaaagcctatcctaacaattatgagactatgaaaatc
cttggatctctttatgcagcttcagaagatcaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagagcagtatcctgatgatgtagaggcatggattgagctagcccaa
attctagagcagactgatatacagggtgctctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcctgaataatgtgggtgctctg
cacttcaggctgggaaacctaggagaagcaaagaaatactttttggcgtcgctggatcgt
gcaaaagcagaggctgagcacgatgagcattactacaatgccatctctgtgacaacatcc
tacaaccttgccaggctctatgaggccatgtgtgaatttcatgaagcggaaaagctctat
aaaaacattttgagagaacatccaaattacgttgattgctatttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagcgcttcaaata
aatcaggaccatccagatgcttggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaagaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggagctgtcttggcacataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacatatctacgtagagcagaagcagtacatcagtgct
gtgcagatgtatgagaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcactgttcaaatgtggcaaattgcaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagtgatacagttctcatgtttaatgtggctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtgctt
aatgctgtgaaagaactggagcttgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttagcacttgctgctacagaagccaggcagtgctctgactta
ctgagccaggcccagtatcacgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgcaaagcaggagcaggaaaaggagctgcttcgccagaaactgctgaaagagcag
gaagagaagcgcctgagagaaaaagaggagcagaagaaacttctggaacaaagagctcaa
tatgtagagaagaccaagaatattctgatgtttactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggtggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaagatggggaagaagaggagggtgagaggaagaagaagaaaagg
aggagaccccagaaggcagaagaggggagcgatgatgaagaacacgaaaacggcccacgg
cctaagaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatggacacgctcgaaatagcaacagtgac
tcggacgacggggagcagcagcacagcaagcgcattgtttctgatagcgattctgataac
aggaacaagtctggcagcgaggcaggcagtccccgcaggtgcagtgcccgcgcgtccgac
gaggagtctgacagcgacaggtccccgaggaagaggcggcgctcggagtcggagcagtcc
gacaatgagtcggtgcagtcagggaggagtcgcggctccggcggctccgagaacgaatcg
cgcccggcttcgcgcagcgccgagtccgacagagactccgagaggggctctgaccacgag
ggctctgccagagcttctgggaacgagtctgaaccagaggcatccaatgatgagggctct
gaagggggctcagatgacagcgattag
DBGET
integrated database retrieval system
