Corvus cornix (hooded crow): 104684639
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Entry
104684639 CDS
T03546
Symbol
RNPS1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03013
Nucleocytoplasmic transport
ccw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104684639 (RNPS1)
03015 mRNA surveillance pathway
104684639 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104684639 (RNPS1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104684639 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104684639
NCBI-ProteinID:
XP_010390376
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All DBs
Position
14:16181476..16189021
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AA seq
321 aa
AA seq
DB search
MWGPFSASLDASEGEKELPGLKKKSFLXSQNNKASSTKAPSPTKRKDRSEEKSKDRSKDK
AATKESGEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSSSTGSSSGSSSSSASSRS
GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPRPTKVHVG
RLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDGG
QIDGQEITATAVLAPRPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRR
SRSRSPGRRRHRSRSSSNSSR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcccattcagtgcttctttggatgcctctgaaggggaaaaggagttaccagga
ttgaaaaagaagagtttcctangaagtcaaaataataaagcttccagcactaaggctcct
tcaccaaccaagcgtaaggacaggtctgaagagaaatcaaaggaccggtccaaggataaa
gcagccactaaggaatcaggtgaaaaggatcgtggtcgggacaagacacgcaaaagacgc
agtgcttccagtgggagcagcagtaccagatcccgttccagctcaacttccagctcaggg
tccagttccagcactggttctagcagtggctcaagttcctcttctgcctcgagccgctct
gggagctccagcacctcacgcagttccagttccagcagctcttctggatctcccagtccc
tctcgacggagacatgacaacaggagacgatcccgctccaagtccaaaccacccaagaga
gatgaaaaggagcgcaagaggcggagcccatcacccagacccacaaaagtgcatgttgga
aggctcactagaaacgtgaccaaggatcacatcatggaaattttttccacttatggaaag
attaaaatgattgacatgccagttgacaggctaaacccacacctttccaaaggttatgct
tatgtggagtttgagaacccagatgatgctgagaaagccctgaaacacatggatggaggc
cagattgacggtcaggaaatcacggccacagctgtgctggccccacggcctcggccgcct
ccccggcgcttcagcccccccaggaggatgctgccaccgccgcccatgtggcgcaggtcc
ccccctcgcatgaggaggaggtcccggtctcctcggcgcagatcccctgttcgccggcga
tcccgatccaggtctcccggacgaaggcgccatcgcagccgctccagctcaaactcctca
agataa
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