Corvus cornix (hooded crow): 104684880
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Entry
104684880 CDS
T03546
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104684880 (VPS35L)
Membrane trafficking [BR:
ccw04131
]
Protein recycling
Others
Retriever complex
104684880 (VPS35L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
104684880
NCBI-ProteinID:
XP_039416370
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All DBs
Position
14:1298712..1345616
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AA seq
969 aa
AA seq
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MLGDSCPAGRLRHARSRNYVSESEVCKLESMPLDFGDYHPLKPITVTESKTKKMNRKGST
SSTSSSSSSSMMDPLSSVLDGTDPLSLFAAAADPVTTAPPMDGARRKRDKDESSAVGSDF
EPWSSKRGEILARYTTTEKLSINLYMGSEKGKATTTGSAVSEKVRTRLEELDDLEEGSQK
ELLNLTQQDYMNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLI
TDILDTFGKLVYERILSMCVDNRVSLPDNFSPESVNDTAKETCLNWFFKIASIRELIPRF
YVEAAILKCNKFLSKTGISECLPRLTSMIRGIGDPLVAVYARAYLCRVGMEVAPQLKESL
NKNFFDFLLTFKQIHGDTVQNQLVVQCVEIPLYLTLYSPAIDWILQCIAYHAPDVLLTEM
MERCKKLGNNALLLNSVMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLAL
ADPPENDRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMT
PDRAFEDAYPQLQSIIQKVITYIYDFALLFSVEKFLPFLDMFQKESVRVEVCKCIMESFI
KHQQESTKDPVILNALLHICKTMHDSVNALTLEDEKRTLAALINGFIKMVSFGRDFEQQL
SFYVEARSMFCNLEPVLVQLIHSVNQLAMETRRVMKGNHSRKTAAFVRACVAFCFITIPS
LSSIFTRLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMISVDGKMRPSDAFLLE
FLCNFFSTLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQE
AYIYHVDKVDSNDALYGGDSKFLAEINKLSETVVSQILDHLKTLGKEESLKRQSQLALYF
FNTILAHGDLRNNRLNQLSVNLWNLSQKHGFADTKTMVKTLEYIKRRSKQPEMSHFTELA
LRLPLQSRT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcgattcttgcccagccgggaggctgaggcatgcaagatcaagaaactatgtg
tctgaatctgaagtgtgcaaactggaatctatgcccttggattttggcgattaccatccg
ctgaaacccattacagttaccgaatccaagaccaagaagatgaaccggaaaggaagtact
tcttctacctcctcttcctcctctagttctatgatggacccactgagcagtgtgttggat
ggcaccgatcccttgtcattgtttgcagcagctgcagatcctgtgactactgctcctccc
atggatggtgcacgaaggaaacgggataaagatgagagctcagcagtaggaagtgacttt
gaaccatggtcaagcaaacgtggtgaaatccttgctagatacacaacaacagagaagctt
tctattaatctgtacatgggatctgaaaaaggaaaagccacaactactggttcagcagtt
tctgaaaaagtgaggacaaggttagaagaactggatgatctggaagagggatcgcagaaa
gagctgttgaatttgactcagcaggattacatgaaccggattgaagaactgaaccagtct
ttaaaggatgcttggtcctctgatcagaaagtgaaagctctgaaaatagtcatccagtgt
tctaagcttctttcagacacaactgtaatccagttttatccaagtaaatttgttttaatt
acagatatccttgatactttcgggaaactcgtgtatgaaagaattctgtcaatgtgcgtg
gataaccgagtctctctgccagataacttttctccagagagtgttaatgatacggcgaaa
gaaacttgcttaaactggtttttcaagattgcttcaatcagagaactcattcccagattt
tatgtggaagcagcaatactgaagtgcaataagttcctatccaaaacggggatttcggaa
tgtctcccacggttaacatctatgattagaggaattggagatccactggttgcagtctat
gccagagcatacctttgcagggttgggatggaagtggcaccacaactcaaagaaagcctg
aacaaaaatttttttgacttccttctaacatttaaacaaatccacggggatacggttcag
aaccagctggtggtgcaatgtgtggagatccctttgtatttgaccctgtattctcctgct
atagactggattttgcagtgtattgcctaccatgcccccgatgttctgcttactgagatg
atggagagatgcaaaaaattggggaacaatgctttgctgttgaattcggtaatgtcagcg
ttcagagcagagtttattgctgcgagatcaatggacttcattggcatgattaaagagtgt
gatgagtctggattcccaaagcatctcctctttcgctccctgggcttaaacttggcgttg
gctgatcctcctgaaaatgatcgtcttcaaatattaaatgaagcctggaaggtgattaca
aagctgaagaacccacaggattatatcaactgtgctgaagtgtgggtggagtatacctgc
agacattttacgaagcgagaggtcaatacagttctggctgatgttatcaaacacatgact
cctgatcgagcatttgaagatgcttacccacagctgcagtcaattattcagaaggttatt
acctatatctatgactttgctctgcttttttcagtggagaaattcttgccatttctggat
atgttccagaaggaaagtgtgagagtggaggtttgcaagtgcattatggaatcttttatt
aagcatcagcaggagtcgacgaaggatcccgttatactcaatgctctcctgcatatctgt
aagacgatgcatgactctgtgaacgcactaacacttgaggatgagaaaagaacattagca
gctctgataaatggattcataaaaatggtttcatttggccgtgactttgaacaacagctg
agtttctatgtcgaagccaggtcaatgttttgcaatctggagcctgttctggtccagctg
attcattctgtgaaccaactagcaatggaaacaagaagggtgatgaaaggaaatcattcc
agaaagacagctgcattcgtcagggcttgtgttgccttctgcttcattacaattccatct
ctgagcagtatcttcacacgtcttaatctgtatctacactctggacaggtagctctggca
aaccagtgcctttctcaagctgatgcttttttcaaagctgcagtgagccttgttcctgaa
gtgccaaaaatgatcagtgtagatggaaagatgcgaccttctgatgccttcctcctcgaa
ttcctttgtaattttttttccacattattagttgttccggaccatccagaacaaggagtg
ttgtttcttgtgcgaggattactaaatgtgatccaggattatacttgggaggataacagt
gatgacaaagtcaggatttatactaatgttttgcatctgctctctgcaatgactcaggaa
gcatatatctaccatgtagataaagttgattccaatgatgctctgtatggtggagactcc
aagttcctggctgaaatcaataaactgagtgaaacagtggtgtcacagatcctggatcat
ctgaaaaccctgggaaaagaggagtccctgaagcggcagagccagctggcactctatttc
tttaacaccattctggctcatggggacctacgaaacaacagactgaaccagctttcagtc
aatctctggaatctctctcagaaacacggcttcgctgacaccaagactatggtgaaaacc
ctggaatacatcaagaggcggagcaaacaacctgaaatgagtcacttcacagagctggcc
cttcggcttcctctgcagtccaggacctga
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