Corvus cornix (hooded crow): 104684883
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Entry
104684883 CDS
T03546
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104684883 (TMC5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104684883 (TMC5)
03037 Cilium and associated proteins [BR:
ccw03037
]
104684883 (TMC5)
Transporters [BR:
ccw02000
]
Other transporters
Pores ion channels [TC:
1
]
104684883 (TMC5)
Cilium and associated proteins [BR:
ccw03037
]
Other cilia and associated proteins
Stereociliary proteins
104684883 (TMC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
104684883
NCBI-ProteinID:
XP_039416400
LinkDB
All DBs
Position
14:1250336..1273673
Genome browser
AA seq
1003 aa
AA seq
DB search
MSYHYNEAFENPDYHFSETLEIDRRGSSQSNPFSHQTPYDPSLPSCYGEGRGREQNYPVA
IPMASLGAGSECSQDLPSTSPYGNFTDNLSFEPEPELNYTPQSTFHLLDYPYTHRISSGS
EDSFIRRRNRRPPDEIFITSSMFETDPACSEEEDLVGSLASMSINERIKAIQKLPETMRK
RREIRNKVLKEITKKSRHRGAHPSCCTRCLQGAAVSFRRFGNTLSEYFHLLQIWHKALKI
IGAEFGTSVLSYFVFLKWLLNFNLFSFLINFGFITIPQFLAAEPNNLSFTGLELLTGAGY
FQKTVLYYGFYTNATISKIENGPSYNMQLAYIFTVGTYFVICFLILLFSMAKSFSRNLVN
PQGYSGNASKLLCTWDFNITNEKAVKLKQKNLSTQIKEDLTEVNKEVLDFSVMERVLRIA
IHLLAWVASLGTAAAACTAVYFLSVNNLELFMKGHRNDLEGQAAMLVLPVIASLLNTLIP
FFFSWLGHLERFQTPGQHIYVTIARIIILKMSVVGILSYYWLNIVATSESQCWETLVGQD
IYRLVLVDFIFCLLGSFFGEFLRRQSLCTCLVHIAAPPYKEAGVSFFPLEMETHAGRKPH
STLMDFLRVRIIGTTVCVSLGPPEFDIGRNVLDLIYAQTLTWIGILFSPLLPGIQMIAFL
IVFFVKKVSLMRNCQPPRKVWRTAQMMTSFLFLLFCPSFLGVLSVVGVTVWRLKPSEGCG
PFRGLSSMYAAVSEWVQILESYTASKWVVWIYHNLITSELFFFILSSIVLIVTYLYWQII
QGRKATTKRLHEQIINAGKEKLLLLKRLRAQQRATQRLSALRGQGQQRRSSSYHPPRQPA
QEVPDYPGRAFDRSQNTSYNEHPFSAGISSSSDFPPAVGTGHGPGVCTEDGDSPVPETPA
ATPLGPLERGLFARRAICPSVATWGAPVTLSSTSRGHSTREGAGQDLDITYRCSRMCTTS
PRLLSERMGEALVILTGKAAPLCFFVPGRSSRYKQKIHPPSRS
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattacaatgaagcctttgaaaatccagactaccacttctctgagacattg
gaaattgatagaagggggagttctcaaagcaatccattctcccaccaaaccccttacgat
ccttcactgcccagttgctatggagaaggcagagggagggagcagaactaccctgtggcc
atccccatggcctcgctgggagctggctctgagtgcagccaggacctaccgagcacaagt
ccatatggaaatttcacagacaatctttcctttgagcctgagccagaactgaattacacc
ccacagtctaccttccatctgctggattatccctatacccacagaatttccagtggatca
gaagacagcttcattcggagacgcaaccgaagaccacctgatgagatcttcattacttct
tccatgtttgaaacagatccagcgtgcagtgaagaggaagatttagttggaagtcttgca
agtatgtccatcaatgaaaggattaaagcaatccagaagcttccagagaccatgagaaaa
aggagagagatcagaaataaagttcttaaagaaataacaaaaaagtcaaggcaccgtggt
gctcacccttcctgctgtacacggtgtctgcagggagcagcagtgtcatttcggcgattt
ggaaatactctttcagaatattttcacctactgcagatttggcacaaggctctgaagatc
attggtgctgagtttggaacaagtgttctttcttactttgttttcttgaagtggctgcta
aattttaacctcttctcattcctcataaactttggtttcatcacaattcctcagtttctt
gcagcagaaccaaataacctttcattcacgggcctggagctgctcactggagctggttat
tttcaaaaaacagtgctctactatggcttttacaccaatgctacaatcagtaaaatagag
aatggtccatcttacaacatgcagctggcctatattttcactgttggaacatattttgtc
atctgttttcttatcttgttgttcagcatggcaaaatccttctccaggaacttagttaac
cctcagggatactctgggaatgccagcaagctgctctgcacttgggacttcaatataact
aatgaaaaagctgtgaagctgaaacaaaagaatctcagcacacagataaaggaagacctc
actgaagtaaacaaagaagttctagatttttctgtgatggagagagttcttcgtattgct
attcaccttcttgcttgggttgcttccctgggaacagcagcagctgcttgtactgctgtt
tacttcctctccgttaataacctcgagctgtttatgaaagggcatagaaatgacctagag
ggccaagctgccatgttggtgctacctgtgattgcttctctcctcaacacattgatccca
ttcttcttctcctggcttgggcacctggagaggtttcagactcctggacagcacatatat
gtcactattgccagaattatcatcctgaaaatgtcagttgttggaatactgagctactac
tggcttaacattgtggctacctcagagtcgcagtgctgggaaactctggttggccaagat
atctatcgtcttgttctagttgacttcatattttgtttgcttggctctttctttggagag
tttttacgaaggcagtctctgtgtacatgcctggtgcatattgctgctcctccttacaag
gaggctggcgtgtccttcttccctttggagatggaaacacatgcagggaggaagccacat
tctactctcatggatttcctgagagtgagaattattggaactacagtctgtgtgagcctg
gggccgccagaatttgatattggacgaaatgttttagatttgatctatgcacagactttg
acctggattggtatcctgttctcacctctgctgcctggtatccagatgatagcattttta
atagtattttttgtgaaaaaggtcagtctgatgaggaattgccagccccctcgcaaagtc
tggagaactgctcaaatgatgacatccttcctgttcctgctgttctgtccttccttcctt
ggagtcctgtctgtcgttggagtcactgtctggaggttaaaaccttcagaaggatgtggt
cctttcagaggcttgtcttctatgtatgctgcagtctctgagtgggtacaaatactggaa
agttacactgcctcgaaatgggtagtgtggatctaccacaacttaattacaagtgaactt
ttcttcttcatcctctctagtattgtactaattgttacctatctttactggcaaataata
caaggaaggaaggccacgaccaaacgcttacatgagcagattattaatgcaggaaaagaa
aagctgcttctgcttaaaagactacgggcacagcaaagggcaacccaaagattgtctgcg
ctgagaggacaaggccagcagagaagatcctcttcataccacccacccaggcaacctgcc
caggaagtgccagactacccaggaagggcatttgacagaagtcaaaacacatcctacaat
gagcatcccttttctgctgggatctcgagcagcagtgactttccaccagctgtgggcact
ggacacggacctggtgtttgcactgaggatggtgactcaccagtgccagaaactccagca
gcaacaccacttggacctttggagcgagggctatttgccagaagagccatttgcccttca
gtggccacatggggagcacctgtcacgctcagcagcaccagcagaggccacagcactcgt
gaaggggcaggacaggacctggacataacctacaggtgctccaggatgtgcaccacgagc
ccgagactgctgagtgaacgaatgggagaggctcttgtcatcctgacagggaaagcagct
cccttgtgcttctttgtgcctgggcgaagctcaaggtacaaacaaaaaatccaccccccc
agcaggtcatag
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