Corvus cornix (hooded crow): 104684946
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Entry
104684946 CDS
T03546
Symbol
NLRC3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccw04054
]
104684946 (NLRC3)
Pattern recognition receptors [BR:
ccw04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104684946 (NLRC3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
LRR_8
FISNA
DUF5474
Motif
Other DBs
NCBI-GeneID:
104684946
NCBI-ProteinID:
XP_019136980
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All DBs
Position
14:14411772..14427990
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AA seq
1062 aa
AA seq
DB search
MPREASDGRGLDQPVPRAAGEVHLSAVPGGDHLPPAQAGAPDGRGGCPGAGSEPPTRAEP
MVQKHLESLQSSYGNGLEPGALQRLTNLLLVEGLTDIQQKEHDILQVETTKGLPNVSKSI
PLEKLFLPLSKVSIPPRISVTIGVAGIGKSTLVKLFVCTWAKGDINRDIMFVLPLTFREL
NTYEKLSAERLLCLAFPHITEPGCISTGAARTLLILDGLDEFKTPLDFSNTVVCTDPKKE
IQVDNLITNIIRGNLLQEASVWVTSRPAAARQIPGGLVDRMTEIRGFGAVEMKDFLDQMF
LDNRDLSSQVLKHIRANRSLHVLCTIPGFCWISGSSIAYFLKHCNDQSQEAAVVPRTLSE
IYSYYFKMALSGDWLEKPRETLRIEQAVNTSKKLVGSLGRLAFYGLLRKKHVFYEQDMKA
YGIDLSLLHSSLSTRLLLKEDMQTSTAYYFSHLTMQEFLAALYYYTAAKRTIFDLFVESG
MSWLKLGFLNHFRSAVQRALQAEDRQLDIFVRFLSGLLSPQVNKLLAGWLLAKDEHSGFR
SQAISVLQGCLNTDHAISSRAVNAMHCLQEMQHTDIAKAVEEAMRSESLAGMLTPTNCSA
LAYLLQVSDVCLEETNLSNCLTYNVCKSLLSQLLFCHSLRLDNNQFKDDVMELLGSMLSV
KDCQIQRLSLAENQISNKGAKALARSLLVNRSLMVLDLRSNSIGPTGAKALADALKKNQI
LLSLNLQHNSIKEDGATFLAEALLTNHRLVTLHLQKNAIGAQGARKIAEALKQNRSLREL
ILSSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISSAGVTALTVALCSNKGLLSLNLRE
NSISKEGGPAIARALRSNSTLRKLDLAANLLYDDGGKAIAAAIKENRALTSLHLQWNFIQ
AKAATALAQALQSNSSLASLDLQENAIGDEGMAALSAALKVNTTLADLHLQVASVGAAGA
QALAEALMVNKSLQILDLRGNSIGVAGAQAMANALKVNRSLRRLNLQENSLGMDGAICIA
TALKGNHGLTYVNLQGNRIGQSGAKMISDAIRTNSPDCVVDV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggaggcctctgatggaaggggcctggatcaaccggtaccgcgagcagctggc
gaggtccatctttctgcagttcctggaggagatcatctcccacctgcgcaggctggagct
cctgacggccgaggaggctgcccaggtgcaggcagcgagccccctacccgagcagaaccc
atggtgcagaaacacctggagagcctccagagctcctacgggaacggcctggagccagga
gccctgcagcgcctcaccaacctgctgctggtggaaggcctgaccgacatccagcagaag
gagcacgacatcctgcaggttgaaaccaccaaaggcctgccaaacgtatccaagagcatc
cccctggagaagctcttcctgcctctctccaaagtcagcatcccccctcggatctctgtc
accatcggcgtggccgggattggcaagagcactctggtgaagctgtttgtctgcacctgg
gcaaagggggacatcaacagggacatcatgttcgtgctgcccctcaccttccgggagctc
aacacctacgagaagctctctgctgagcgcctcctctgcttggccttccctcacatcacc
gagcccggctgcatctcgaccggagccgcccggaccctgctcatcctcgacggcctggat
gaattcaagacccccttggatttttccaacacagtggtttgcaccgatcccaaaaaggag
atccaagtggacaacctgatcaccaacattataaggggaaacctgctgcaggaggcctct
gtgtgggtcacgtcgcggccggcggcggccaggcagattcctggtgggctggttgatagg
atgacggaaatccgagggtttggggctgtagagatgaaggacttcttggaccagatgttc
cttgacaacagagacctgtccagccaagtcctgaagcacatcagggctaacaggtcgcta
cacgtcctgtgcaccattcctggtttttgctggatttctggctcctcaatcgcttatttc
ctgaaacattgcaacgatcaatcccaagaagcagctgtggtccccaggaccctgtcagaa
atctactcctattattttaaaatggctctgagtggcgactggctggaaaagccgagagaa
accctcaggatcgagcaggctgtgaacaccagcaagaagctggtgggcagcctgggcagg
ctggccttctacgggctgctgcggaagaaacacgtgttctacgagcaggacatgaaggcc
tacggcatcgacctctccctgctgcacagcagcctctccacccgcctcctgctcaaagag
gacatgcagacctccacagcctactacttctcccacttaaccatgcaggagttcctggca
gctctttattactacacggcggccaagcggaccatcttcgacctctttgtggagagcggc
atgtcctggctcaagctgggcttcctcaaccacttcaggagcgccgttcagagggcgctg
caggccgaggacaggcagctggacatctttgtccgcttcctctcggggctgctgtcccca
caggtgaacaagctgctggccgggtggctgctggcgaaggacgagcacagcgggttcagg
agccaggccatcagcgtcctgcagggctgcctgaacaccgaccacgccatctcctcgcgc
gccgtcaacgccatgcactgcctgcaggagatgcagcacacggacatcgccaaggccgtg
gaggaggcgatgaggagcgagagcttggctgggatgctcacccccacgaactgctctgcc
ctggcttatctcctgcaggtctcggatgtctgtctggaggagacaaacctgtccaactgc
ctcacctacaatgtatgtaagagcctgctctcccagcttctcttctgccacagcctcagg
ctggacaataaccagtttaaggacgacgtgatggagctgctgggcagcatgctgagcgtg
aaggactgccagatccagaggctcagcttggcagaaaatcagatcagcaacaagggagcc
aaagctctggccaggtcgctgctggtgaacaggagcctgatggtgctggacctgcggagc
aactccatcggccccaccggagccaaagccctggctgatgccctgaaaaaaaaccaaatc
ttgctctccctgaacctccagcacaactccatcaaggaggacggggccaccttcctggcc
gaggccctgctgaccaaccacaggctggtgaccctgcacctgcagaaaaacgccatcgga
gcccagggcgcccggaaaatcgcggaggcgctgaagcagaaccgcagcctgagggagctg
atactctcgagcaactcggtgggagacaacggctccattgccttggctgaagctctgagg
gtgaaccacagcctgcaaagccttgatctccagagcaactccatcagcagtgcaggggtc
acagcgctgacagtggctctctgctccaacaagggactcctcagcctcaacctccgagag
aactccatcagcaaggaggggggccctgccatcgcccgtgccctgcggagcaacagcacc
ctcaggaagctggacctggcggccaacctgctgtacgatgacgggggcaaggccatcgct
gcggccatcaaagagaaccgggcactcacatccctccacttacagtggaacttcatccag
gccaaagcagccacggccctggcacaagcactacagtccaacagcagcctggccagcctt
gacctgcaggagaacgccatcggagacgagggaatggccgccctctctgccgcgctgaag
gtcaacaccaccctggcagacctccacctgcaagtggcttcagttggcgcggccggtgcc
caagccctggcagaagccttgatggtcaacaagagcctgcagatcctggacctgcgggga
aactccatcggcgtggctggggcccaggccatggccaacgcgctgaaggtgaaccgcagc
ctgcgccggctcaacctgcaggaaaactccctgggcatggacggagccatctgcatcgcc
acggccctgaagggcaaccacggcctcacctatgtcaacctgcaggggaatcgcattggg
cagtcaggagccaagatgatctcggacgccatccggacaaactcgcccgactgcgttgtg
gacgtgtga
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