Corvus cornix (hooded crow): 104684960
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Entry
104684960 CDS
T03546
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
ccw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104684960 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104684960 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104684960 (MGRN1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104684960 (MGRN1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104684960 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104684960
NCBI-ProteinID:
XP_039416290
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Position
14:complement(13917062..13967178)
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AA seq
623 aa
AA seq
DB search
MGSLLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYITPAPHEPVKTLRSLVNIRKDSLRLVRYKDDVDSPTEENGKQKVLYSL
EFTFDADARVAITIYCQATEEFVGGMAVYSTKNPSLQSETVHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIRAVVDEGDVVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
NSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSVDHDEHSRPFK
PLKVSSVSLPSRKPRREVRTSSDNIPPGYEPISLLEALNGLRSVSPSIPSAPLYDEISFS
GVVDGMPPASRPLVGMDRALEGGHQKGKRSKSPDSTLRSPSSPIHEEDEEKLSEDSDSQA
VLSGGELVLRETSSPESVAGEEMEEASSVQQGSRPPSVEDVLQDGGCGESRSLTRSESDA
PVDVFLPGSSDFTQTLPVRGTGSPTQPLLSSRPVAPGGRAEPLVSGAGPCPCAGPRQGSP
GGRCVGLAPTRFRHSPCMFPGGG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggctccctgctcagtcggcgcatcgcgggcgtggaggacatcgacatccaggccaac
tcggcctaccgctacccgcccaagtccggaaactactttgcaagtcacttctttatggga
ggagagaagtttgacacccctcaccccgagggttacctttttggtgagaacatggactta
aacttcctggggaatagaccagttcagtttccctatataactccagctccacacgagcca
gtgaagacactgaggagtttggtgaacatccgcaaagactctctccgacttgtgaggtat
aaagatgatgttgacagccctaccgaggagaatgggaagcagaaggtcctgtacagcctg
gagttcacctttgatgcagatgcccgtgttgccatcacaatctactgccaggctacagag
gagtttgttggtggcatggccgtatacagcacaaagaatccctctctgcagtccgagacg
gttcattacaagagaggggtaagccagcaattctccctgccttccttcaagattgatttc
tcagagtggaaggatgatgagctgaactttgacttggaccgtggcgtgttccctgtggtc
atccgagcagtggtggatgaaggggatgtagtggttgaggtcactggtcatgcccatgtt
cttctggctgcatttgaaaagcacgttgatggcagtttttctgtgaaaccgcttaaacag
aagcagatcgttgaccgggtgagctacctgcttcaggagatctatggcatcgagaacaaa
aacaaccaggagaccaagccttcagacgacgagaacagtgacaacagcaacgagtgtgtg
gtttgcctgtcggacctgcgggacaccctcatcctgccctgccgccacctctgcctctgc
aactcctgcgccgacaccctgcgctaccaggccaacaactgccccatctgcaggctcccc
ttccgtgccctgctgcagatccgggcagtgaggaagaagccaggggctctgtcgccggtg
tccttcagccctgtcctggcacagagtgtggaccatgatgagcattctcgcccctttaaa
ccccttaaggtgagctctgtctccctgcccagcaggaagcctagaagggaagtaagaaca
agctctgacaacatccccccaggctacgagcccatttccctgctggaagcgctgaacggc
cttcgctcggtgtccccctccatcccctcggcccctctgtacgatgagatcagcttctcc
ggggtggtggatgggatgcctcccgccagccgcccgcttgtgggcatggacagagccctg
gagggtggccaccaaaagggcaagcgcagcaagtctccagacagcacactacggtccccc
tcatccccaatccatgaggaggatgaggagaagctctccgaggactctgactcgcaggcg
gtgctgagtgggggtgagctggtcctgagggagaccagctctccagagagcgtggcaggg
gaagagatggaggaggcctcatcggtgcagcagggtagccgcccgccctcggtggaagat
gtgctgcaggacggcggctgcggcgagagccggagcctgacgcggtccgagagtgacgcc
ccggtcgatgtcttcctgccaggctcatccgacttcacccaaacgctccccgtccgcggc
accggcagccccacgcagccccttctttcgagcagacccgtcgcacctggaggacgagca
gagcctctcgtgagcggggccggaccctgcccgtgcgccggaccccgccagggctctccc
gggggacgctgtgtgggtctcgcaccgacacggtttcggcacagcccgtgcatgtttcct
ggcggtgggtag
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