Corvus cornix (hooded crow): 104684976
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Entry
104684976 CDS
T03546
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03420
Nucleotide excision repair
ccw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104684976 (ERCC4)
03460 Fanconi anemia pathway
104684976 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104684976 (ERCC4)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104684976 (ERCC4)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104684976 (ERCC4)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104684976 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
104684976
NCBI-ProteinID:
XP_039416357
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All DBs
Position
14:9749368..9766822
Genome browser
AA seq
903 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLAVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLY
LWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLRELKRYNPALEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRTADEKLNQKGKCSEKRDVKKENELKR
ELVLESNPKWEALREVLKEIEKENKNSDNLGGPGQVLICASDDRACAQLREYIIAGAEAF
LTRLYNKTFGKEEKAGEVWIKDRKAIKSKGNAKPDTGPQAKKAKLTASSKQNKHKKQQDR
TIIEMIGKTEEEKREEVEVEDNQELSSSQEANTEETIPEDFDVNLPSDCYYGIFKDPLTI
IHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGS
TEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNIDLLRDARPASVSADTRKAG
GQEQKGVQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDLI
GSLNNGRLYAQCVSMCRYYKRPVLLIEFDPNKSFSLIPRGSLQPEISSNDVTSKLTLLTL
HFPKLRILWCPSPHTTAELFEELKQNQPQPDAETAMAVTADSEILPESDKYNPGPQDFLL
KMPGVNAKNCRALMTHVKSIAELVTLSKDELSKILGNAANATQLFDFIHLTYAEALAKGK
SKR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggagctgttccaccgcgacggg
ctcgccgtgtgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccagcctcgtgctcgtgctcaacaccagccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatcttcctcggcgcgttaccaatgaa
attgcaaataatactcgatatgagttttacacacaaggaggagtcatctttgcaacaagt
cggatccttgtggtagatttccttactgacagaattcctgccaatctcattaccggcatt
ttggtgtacaaagcacacagaatcattgagtcctgtcaggaagcgtttatcttgcgactt
taccgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aacactggcttttgtcatgtggaaagagtgatgaaaaatctttttgtcgggaagctttat
ctgtggccaagatttcatatagcagtgcactcatttttagagaagcataaacctgaagtg
gtggaaatacacgtggcaatgacccctgctatgcttgctatccagactgcaatcctggac
attctgaacgcatgtctgagggaactcaaacgttataatccagctcttgaagtagaagat
ctatcattagagaatgctattgctaaaccttttgacaagacaatacgtcactatttagat
cctctctggcatcagcttggagctaagacaaagtctttggtccaggatttgaagatcctc
cgtactttgctactgtatctaacccagtatgattgtgtcactttccttaatctcctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggctggctattccttgactcc
agtacttcaatgtttgtgaatgctcgagctcgagtttatcgcactgcagatgagaaactg
aatcagaaaggcaaatgctctgaaaaacgtgatgtaaaaaaggaaaatgaactgaaaagg
gaattggttctagaaagtaacccaaaatgggaagctttgagagaagtactgaaagagatt
gaaaaagagaataagaacagtgacaaccttggtggtccagggcaagtgctcatttgtgcc
agcgatgatcgagcctgtgcacagctcagggagtatattattgctggagcagaagctttt
ttaacaagactgtataacaaaaccttcggaaaggaggagaaagctggagaagtgtggatt
aaggacagaaaagccatcaagtccaaaggaaatgccaaacctgacacagggcctcaagcc
aagaaagccaaactcacagcttcttcaaaacaaaataaacacaagaagcagcaagaccgg
actataattgaaatgatagggaaaacggaggaggaaaagagagaggaggttgaggtggaa
gacaaccaagaattaagtagtagccaagaagccaacactgaagagaccattcctgaagat
tttgatgtgaacttgccctcagattgttactatgggattttcaaggacccactgacgatt
atccacccgctgcaggggtgtggagatccctacgcgctcactcgggtgctgcacgaagta
gaacccagatatgttgtgttatatgatgcagaactcacttttgttcggcagctggaaatc
tacaaggcaagcaggcctggaaagcctttgagagtttatttcctcatatatgggggctcc
acggaagagcagcgctacctcacagctctgaggaaggagaaggaggcctttgagaaactt
attcgagagaaggccagcatggttgttcctgaagaaagagaaggacgagatgaaacaaac
atagacctcctcagagacgctagacctgcctctgtctctgctgacacacgcaaagcaggt
ggacaggaacagaagggtgttcagcaaaccgtaatcgtggatatgcgggaattccgtagt
gagcttccatcactgatccatcgccgtgggatcgacattgagcctgtgactttggaagtt
ggggattatattctaactcctgacatctgtgtggagcggaagagtatcagcgatctgatt
ggttccttaaacaacggcaggctgtatgcacagtgcgtttccatgtgccgctactacaag
cggccagttctcctcattgaatttgatcctaacaaatccttctccttgatcccacgaggc
tctttacagccagaaatttccagcaatgatgttacttctaaactaacccttcttacactg
cacttcccaaagttacgaatcctgtggtgtccctctccccacactactgctgaactgttt
gaagagttgaaacaaaaccaaccccaacccgatgcagaaacagcgatggctgtcaccgca
gattccgaaattctccctgagtcagacaagtacaaccctgggcctcaggacttcctgtta
aaaatgccaggggttaatgcaaaaaactgccgtgccctaatgacccacgttaaaagcatt
gcagagctggtgacactgtccaaggacgagctctccaagattttgggtaatgctgccaat
gctacacaactctttgactttattcacctgacctacgcagaggcactagcgaaaggaaaa
agcaaaagatga
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