Corvus cornix (hooded crow): 104685025
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Entry
104685025 CDS
T03546
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03015
mRNA surveillance pathway
ccw05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104685025 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104685025 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104685025 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104685025 (CPSF4)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104685025 (CPSF4)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104685025 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_12
zf-CCCH_2
zf-CCCH_4
zf-CCCH_RBM22
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
104685025
NCBI-ProteinID:
XP_019137317
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All DBs
Position
14:6158777..6165622
Genome browser
AA seq
278 aa
AA seq
DB search
MQELIASVDHITFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMQGHPKSLESCSLKIT
TVGTEDPGRWSRSPATSVVKKVIMPTDAPKDTWPFSVDSEGAAGRCKGAVTTEERFLPST
MSGAINQVVFLMPLLKELVRGWLLLSNIFVIVPNFFKF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagctcatagccagcgtggaccacatcacgttcgacctggagctggccgtggag
cagcagctgggggcacagccgctccccttccctggcatggacaagtcgggcgcagctgtc
tgtgagttttttttaaaggcagcatgtggaaaaggaggcatgtgcccgttccgacacatc
agtggggaaaagacagttgtttgtaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagttcctgcacgaatatgacatgaccaagatgcccgagtgttacttctactcc
aaatttggggaatgcagtaacaaggaatgcccatttttgcacatcgacccggaatctaag
atcaaagactgtccctggtatgacagaggcttctgtaaacacggtcccctctgcagacat
cggcacactcggagagtcatttgtgtgaattacctggtaggattctgtccagaggggcct
gcctgtaaattcatgcaaggacaccccaagtcattggagtcatgcagtctcaaaataaca
acagtgggaacagaggaccccggccgttggagcaggtcacctgctacaagtgtggtgaaa
aaggtcattatgccaacagatgcaccaaaggacacttggcctttctcagtggacagtgaa
ggtgcagcaggaaggtgcaagggagctgttaccactgaggaaaggtttctgcctagcaca
atgtctggagctattaatcaggttgtttttttaatgccattactgaaagaactggtcaga
ggctggctgctgctaagcaacatttttgtaattgtccccaacttttttaagttttaa
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