Corvus cornix (hooded crow): 104685139
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Entry
104685139 CDS
T03546
Symbol
HEXB
Name
(RefSeq) LOW QUALITY PROTEIN: beta-hexosaminidase subunit beta
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00511
Other glycan degradation
ccw00513
Various types of N-glycan biosynthesis
ccw00520
Amino sugar and nucleotide sugar metabolism
ccw00531
Glycosaminoglycan degradation
ccw00600
Sphingolipid metabolism
ccw00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ccw00604
Glycosphingolipid biosynthesis - ganglio series
ccw01100
Metabolic pathways
ccw04142
Lysosome
Module
ccw_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104685139 (HEXB)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
104685139 (HEXB)
00513 Various types of N-glycan biosynthesis
104685139 (HEXB)
00531 Glycosaminoglycan degradation
104685139 (HEXB)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
104685139 (HEXB)
00604 Glycosphingolipid biosynthesis - ganglio series
104685139 (HEXB)
00511 Other glycan degradation
104685139 (HEXB)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104685139 (HEXB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccw03110
]
104685139 (HEXB)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
104685139 (HEXB)
Chaperones and folding catalysts [BR:
ccw03110
]
Intramolecular chaperones
Others
104685139 (HEXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
104685139
NCBI-ProteinID:
XP_039423225
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Position
Z:66223812..66241355
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AA seq
560 aa
AA seq
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MGRAMGLAGLLLGLVVVPAVLVSTSLRHGAPRAGAEPEPSDWEVAADAVPEDSLWPLPQW
VRTYSRQLQLAPGRFQLVHGAGSSAGPGCGLLQDAFRRYYEYMFGHSRRRDRSRRPLAAR
AEPELFQLQVVIEAGDPGCDRHPQLTSSEAYHLTVTEPVAILKAYEVWGALRGLETFSQL
VHEDDYGSFLVNESEINDFPRFAHRGVLLDTSRHYLPLKSILTNLDAMAFNKFNVLHWHI
VDDQSFPYQSIYFPELSDKGAYSSNLIYTPTDVHLVIEYARLRGIRVIPEFDTPGHTQSW
GKGQKDLLTPCYNGEQPTGSFGPVNPVWNTTYDFMTKFFKEISSVFPDEFIHLGGDEVDF
SCWKSNPEVKKFMKKQGFGTDYAKLESYYVQNIVDIVSSYNKGQMVWQEVFDHKAQLKPD
TVVQVWMASNYAHELSSVTGAGFTTILSAPWYLDYISYGQDWKKYYSVEPLNFPGTEKQK
KLVIGGEACLWGEFVDATNLTPRLWPRASAVGERLWSSSNVTNLQDAYKRLTNHRCRMLR
RGIAAEPVFVGYCAHEGRAP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagccatggggctggctgggctgctgctggggctcgtcgtggtgcccgccgtg
ctggtgagcaccagcctccgccacggcgccccgcgggccggggccgagccggagccatcc
gactgggaggtggcggcggacgccgtccccgaggactcgctgtggccgctgccgcagtgg
gtccgcacgtactctcgccagctgcagctggcgcccggccgcttccagctggtgcacggc
gccggctcctcggcgggcccgggctgcgggttgctgcaggacgccttccgcaggtactac
gagtacatgttcgggcattcccggcggcgggaccggagccgcaggccgctggctgcccga
gcggagcccgagttgttccagctgcaggtggtgatcgaggcgggggaccctggctgtgac
aggcacccgcagctcacctccagcgaggcctatcatttaactgtaactgagcctgtggct
atactgaaagcttatgaggtatggggtgctttaagaggcttggaaaccttcagccagttg
gttcatgaagatgactatggaagctttcttgtcaatgaatctgaaatcaatgacttccca
agatttgctcatagaggagtcttattagacacttcaaggcattatttaccgttgaaatct
attctgacaaacctggatgccatggcttttaataagttcaatgttctccactggcatata
gtagatgatcagtccttcccttaccagagcatttatttccctgaattaagtgacaagggg
gcatactcctctaatctcatctatactcctactgacgtccatctggtgattgagtatgct
cggttaagaggcatcagagttatcccggagtttgataccccaggacacacgcagtcttgg
gggaaaggtcaaaaagatcttctcactccttgctacaatggagaacagccaactgggtcc
tttggacctgtaaatcccgtttggaatacaacttacgacttcatgactaagttcttcaaa
gagatcagcagtgtatttccagatgaattcattcatttgggaggagatgaagtggacttc
agttgttggaaatctaaccctgaagtgaaaaagttcatgaagaagcaaggttttggcact
gactatgctaagctggaatcttactatgttcaaaacattgtggacattgtttcttcctac
aacaaaggacaaatggtctggcaagaagtgtttgatcacaaagcgcagctgaaaccagac
actgtagttcaagtgtggatggcaagtaactatgctcatgaactgagcagtgtcactgga
gctgggttcaccactatcctgtcagcaccctggtacttagactacattagttatgggcaa
gactggaagaaatactacagtgttgaaccacttaacttccctggaactgaaaaacagaag
aaacttgtaataggtggagaagcctgcctgtggggggaatttgtagatgcaactaacctg
acaccaagattatggcctcgagcaagtgctgttggggaaagactatggagcagcagcaat
gtgaccaacttgcaggatgcctacaaaaggctgactaatcatcgatgccgcatgctccgc
cgtggcatagcggccgaaccagtgtttgttggatactgcgcccatgaaggtagagcgccg
taa
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