Corvus cornix (hooded crow): 104685155
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Entry
104685155 CDS
T03546
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104685155 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104685155 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104685155 (SMARCA2)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104685155 (SMARCA2)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104685155 (SMARCA2)
Chromatin remodeling factors
BAF complex
104685155 (SMARCA2)
PBAF complex
104685155 (SMARCA2)
GBAF(ncBAF) complex
104685155 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
104685155
NCBI-ProteinID:
XP_039423188
LinkDB
All DBs
Position
Z:complement(64012718..64133574)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHGMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSVDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAATGP
GPAPGMPGHTAAITPKTWTEGQAPDMNVSNAQQKLPAPAPSGRPSPAPPANQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttctcctggaccagga
ccctcacctggaccgattctgggacctagcccaggaccagggccatctcctggctccgtt
cacggcatgatggggccaagtcctggtccgcccagtgtcccacatccaatgccgacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctgtcgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgagacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccagagcacgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactccgagtcagccaggacccattatagcaggagacccacaa
gttatgaatcagcctaacagagggccttcccccttcagccctgcacagctgcatcagctg
cgggctcaaattctagcatacaaaatgctggcgagaggtcagcccttacccgaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattgggttacatgcaatgagtggtgctgcaactggacca
gggcctgctccagggatgcctggacatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatatgaatgtctccaatgcacaacaaaagcttccagcgccagctcct
agtgggaggccatctcctgctccccctgccaaccagcctgctgccaccatgcctgggccc
tctgtaccacagcccccacctggacaaccttcacccattgtccagctgcagcaaaagcag
aaccgtatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagctaagacaagaggtggtagcctgcatgcgtcgtgacacaaca
ctggagacagcactgaactctaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggagtacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttctaaagccgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggcggaagatgaagaaggctaccgtaagctgattgatcaaaagaaagacagacgc
ctagcctacctgttgcagcagacggatgagtacgtggctaacttgactaacctggtatgg
gagcataagcaggcgcaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggccccgacggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaggcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgagagtggttcggaatatgaggag
gaggatgaggaagaagaatcaagcagactagaagcagatgaaaagatactcctggatcct
aacagcgaggaagtttctgagaaagatgcaaagcaaataatcgagactgccaaacaagat
gtggatgatgaatatagcatgcagtatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcacagaaagggtggaaaagcagtcttcccttcttattaatggcacctta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacagactattgctctcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatacgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaac
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcggatcctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgccgtctccataaagtgcttcggccc
ttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgttccaacac
attgaggagtccttcgctgaacatctgggctactcaaatggtgtcattaatggagctgaa
ctttatcgggcctcagggaagtttgaactactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctggatcacaatactttatcttcttactg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttattatcttt
gacagtgactggaaccctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaatgaagttagagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgcagcaaagtataagctgaatgtagatcaaaaagtaattcaggcaggaatgttt
gatcagaaatcttcaagccatgaacggagagcgttcctacaagctatactggagcacgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaaacgtaaaccccgcctgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaggaagagaaaatattt
ggaagaggatcccgtcaacgcagggatgtggactatagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaggaggaagtccggcttaaa
aagcgaaagaggcgaagaaacgtggataaagattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagaccccctgcagagaagttgtcgcccaatccacccaaactgact
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagttttcattcagctcccatctaggaaagaactaccagagtattacgaattg
attaggaaaccagtggacttcaaaaaaataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagcgaggatgaaagcaatgatgatgaagaagaa
gatgaagaagaagagtcagaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
