Corvus cornix (hooded crow): 104685196
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Entry
104685196 CDS
T03546
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104685196 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccw04091
]
104685196 (FREM1)
Lectins [BR:
ccw04091
]
C-Type lectins
Lecticans
104685196 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104685196
NCBI-ProteinID:
XP_010391268
LinkDB
All DBs
Position
Z:59028781..59118084
Genome browser
AA seq
2174 aa
AA seq
DB search
MKPIEKSWLFLLLPVMLRAVCSSFISLNLGVKVMKGQSVFLSEEDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDMVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEVPEYHGLSRVIDKNILTFDYDRKINLDCTISIISSETH
LPAHGQLVTRKEQQEQFRGDQPFFPGTKHSLGQQCGNGSCTLGLGVINNKKMSCDEFLRM
GIQYRHLDPPSPDTDYIPVRLDLSDSRSKTLHKTEYAWLPVQIKGAVPNRTPKAAPMAKF
TLEVDQFILTPITTTTIDAEDIETPKSLLVFNITKPPPQGFITHLSDHTKPVGSFTWKDL
NDMLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTGLN
LLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLSVRGGKGFMFTVSDIHAGVVHY
HHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIQGS
MLHASDMDSSDDYILFNITKPSQAGEIMKKPGPNLIGYSVNSFLQRDLFNGIIYYHHLGG
EIFEDSLEFVLCDSHDPPNLSEPQVIVVHIIPVDDQLPREAPGVTRHLVVKETEISHLTK
KHLHFIDVEEQDRELTYTVTTAPFFSCTHGYSDAGKLFMVDTIPKLVKDPAALALQSFTQ
HAVNYMKIAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVFTT
HLRVEEGGMTSVTEGHILISDADTKREHLFLLLLRQPQHGVVELDGIPMNGGDRLSYEDL
RTLAARYRHDGSETLTDDVFFAATDGIHFVEFTLQVKVLPVNDELPVMQTGLVPVLHCLE
GEEVVLSSEYIYATDADSDDMELMFVLARQPYHGVVRKAGAAVDRFSQADVIAGLVTYKH
TSGEIGLTPSIEILTVIVSDGEAGLDVKDCCYDGPPPPPVSRHDPFPLYDLNITVLPVDN
QPPSIATGASFVVEEGSSAALTTNHLFATDADTPADDLEFVLVSPPQFGYIENILPSPGF
EKSNIGISIGSFQLKHLKAMNINYVQARHLRMEPTADKFVLYVTDGLHRSAETPFFVLIS
PTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPPDPLVFGVVQGPLYGFLINGAQG
SDILHYKDLITRDHHSHGLLVHNFSMELLKNGMKLMYMHDNSENLTDSFKIQLSDGKHKV
LRTISVKVIPVNDEKPVLSKKNDIEVNIGETQIISSTILSAEDKDTPRGRIYYLFERLPE
NGQLQLKVGQDWVALQTGMKCSQEEVDMNLVRYVHTGTVGSKKQDSFTFYLWDGYNRSPA
VDFYINIKDLEKGDIAVFTKLLRVTKGGRSYITTDVLLALDGTDKPEELLYVITSPAQYG
QIEYVSYPGIPITSFSQMDVARQIVCYVHKAKAVVHEDTFRFIISNGLRTKHGTFKIFLE
AADQALPTLSRNTGLRLMEGATALLTPDVLQLSDPDTAKENLTFLLAQLPQYGHLYFRGV
VLLQYNFTQQDVDNRDVAYKHRGGNSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTIQV
DHLDKMAPKIIHLHCFSDVELLKNGNYGIYITARYLRASDPNTEDDKIIFKILRGPHYGY
LENITTGGFIQEGFSQKDLNSKIILYVINQSREANSDSLEFQVTDASGNSAVPQRLELRW
SRIEMLQTEYEVCENMGLVSLKITRAGHSVEPAFITVKVNEISARLGKDFTVTPSKLVQF
DPGVSTKMWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSHSRS
SGQSKHDFWGRHTLFPVSSGSSSPSRPGSVSLEGIPLPPSKGMTEHGGDRWQEHSLANQS
RTRLRVTGNGRIVHPSSVFRNETDVVFKYHGIVSLKIEDDISSAETNKKAQLQINVISSR
KAEIPQADKAELASEPRLRHKDFFQKACTPDLKGLLHYEESTQKLFQCDGITWKFWNSQS
KEVTMKKCPSGWSYHEGSCYFLVVNHKVTWNTAARACREQYLGSLTSVANEQHMQWLWDF
SGRMPFWIGLNDQVNPGHWEWNGGEPVTYINWRRSSYHFPMRGRNCAFVQKRGKWQATDC
KKVKPSSYICSRKF
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccattgagaaaagctggttgtttctactgctgcctgtcatgttaagagctgtg
tgctcctcctttattagtttgaaccttggggttaaagtgatgaaggggcagtctgtcttc
ctgtcagaagaagacctcaagttttccatacccagagagaaagatgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccacaatggatgtccaattttagatgaa
gacatggtcatgctcaggctgtacaggtttacagaaactgaaacgtttgtagaaacattc
accctccatgtgcagttacttgagccagactgtaacatcataaaaatgcgttcccatgct
ttggaggtccctgaataccacggtctgtccagggtgattgacaagaacatcctcaccttt
gattatgacaggaagataaacctggattgcaccatttccataatctcttcggaaactcac
ctgcctgctcatggccagcttgtcaccaggaaagagcagcaagagcagtttcgtggagat
cagccattcttccctggcactaagcacagcctgggacaacagtgcggaaatgggagctgt
acactgggactaggagtcattaacaacaaaaaaatgagctgtgatgaatttctgaggatg
ggcattcagtatcgacaccttgaccccccctcgcctgacactgattatattcctgtgagg
ttggatctctcagatagcagaagcaaaactctgcacaagacagagtatgcatggctccct
gttcagattaaaggtgctgttcccaaccgaacacccaaagctgccccaatggcaaagttc
accctggaagtagatcaatttattttaacccctattacaaccacaaccattgatgctgaa
gacattgaaactccaaagtccctgcttgtattcaacattaccaagccacctccacagggc
tttatcactcacctatctgaccacacgaaacctgttggctccttcacttggaaagatctc
aacgacatgctcattgcttatcagcctccaaataacagccacacagagaggaggaattat
gaggtggagtttgaggttcatgacttctactttgaaaggagtttgccaatcactgtgcat
ctttctatcagaacaacagatacaaatgcccctcgggtttcatggaatacaggcctcaac
ctcctagaggggcagtcccgacccatcacatggcaacacttccaaatagtagacaatgat
gatatccaaaatgttcgcttggtcacagttgatggcttacagcatgggcggctgtcagtg
agaggagggaaaggattcatgttcacagtctctgacattcacgctggagttgttcactac
catcatgatgacagtgattctactaaggattttgtggtatttagaatttttgatggcccc
cacagcattcgccataagttcccaataaatatcctccctaaagatgacagccctccattt
ctgatcagcaatgtggtcattgaagttcacgagggacagacaatcctgattcagggctcc
atgcttcatgcttctgacatggattccagtgacgattacatactattcaatattaccaag
ccatcacaggctggagaaatcatgaagaaaccaggaccaaacttgatagggtattctgtc
aacagttttcttcagagggatctatttaatggaataatttattatcatcatttgggagga
gaaatatttgaagattcccttgagtttgtgctatgtgatagccatgaccctccaaacctc
tcagagccacaggtgatagtggttcacattatccctgtggatgatcagctacccagagaa
gctccaggagtgacccgtcacctggttgttaaggagactgagatttctcacctaacaaag
aaacatctccacttcatagatgtggaagagcaagacagagagctcacatacaccgtaacc
actgccccatttttctcttgcacccatggctactcggatgctgggaagctgtttatggtg
gacaccatccccaaattggtcaaggatcctgctgctcttgcactgcagtcatttactcag
catgccgtgaactatatgaaaattgcttacatgccacccctgcaggacatcggacctgaa
cctcagcaagtccagtttattttttctgtcagcaatcagcatggaggcactttgtatggg
atctgcttcaatattacaattcttcctgtggacaaccaagccccagaggtctttacaacc
catttgagagtggaagagggtggcatgacctctgttacagagggacacattctcatctct
gacgcagacacaaaacgagagcatctcttcctgctcctgctgaggcagccgcagcatggg
gtggtggagctggatggcattcccatgaatggaggtgacaggctttcctatgaggacctg
cgtaccctggcagccagatatcgtcatgatggctctgagactctcactgatgatgttttc
tttgcagccacagatggcatccattttgtagagttcactctgcaggtcaaggtgttgcct
gtgaatgatgagctacctgttatgcaaacaggccttgttcctgtgctccactgtctagag
ggtgaagaagtggttctctcctctgagtacatttatgccacagatgcggacagcgatgac
atggaactgatgttcgtgttggcccgccagccctaccacggggtagtgaggaaagctggc
gctgctgtggatcgtttctcacaagctgatgtcattgctggtttagtcacatacaagcac
actagtggggagattggcctgactccttccattgagatcttaaccgtaattgtctctgat
ggtgaggctggcctagatgtgaaagactgctgctatgacggacctcctcctcctccagtt
tcacgtcatgatccatttcccctctatgaccttaacatcactgtacttccagtggacaac
cagcctccatcaattgcaactggtgcaagctttgtggtggaggagggctcctcagcagcc
cttactaccaaccatttgtttgccactgatgctgacacccctgcagatgacttagagttt
gtgttggtttctcctccccagtttggttacattgaaaatatactgccttctcctggtttt
gagaagagcaacatcggaataagcataggttcatttcagctgaagcacctgaaagccatg
aatataaactatgttcaagccaggcacctgagaatggagccaacagcagacaagtttgta
ctttatgtcactgatgggctgcatcgctcagcagagactccattttttgtactaatcagc
ccaaccaatgatgaagttccagaattcatagccaggaatattactgttcaagaaggggag
atgaaagagctggatctgtctgttatcaatgcagttgatctggacgtgcctccagaccct
ctggtatttggggttgtgcaggggcccttgtatgggttccttattaacggtgctcaaggc
agtgatattctacattataaagacttaattacccgtgatcaccacagccatgggttgctt
gttcataacttttccatggagctactgaagaacggaatgaagctgatgtacatgcacgac
aactctgaaaacctcactgacagctttaaaattcagctatcagatggaaaacataaagtc
ctcagaaccatttcagtaaaggtcattccagttaatgatgagaaaccagtgctgagcaag
aagaacgatatagaggtgaacataggtgaaactcaaataatttctagcactattctgtca
gcagaagataaagatacccccagaggaagaatttactacttatttgaaagacttccagaa
aatggtcagcttcagctcaaggtaggacaagactgggtcgctctccaaactggaatgaag
tgctctcaggaagaggtggatatgaaccttgtgagatatgtccacacaggaactgtgggg
tccaagaaacaagacagcttcacattttacctctgggatgggtacaacagatccccagct
gtggacttctacataaatatcaaggacttggaaaagggagacattgctgtttttacaaaa
ctccttagagtgacaaaaggaggtcgcagctacattacaactgacgtcctccttgcactg
gacggtactgacaagccagaggagctcctttacgtgataacctccccagcccagtatggg
caaatagagtatgtcagctatcctggcattcccattacgagcttcagtcaaatggatgta
gcacgacagatcgtctgctacgttcacaaagccaaggcagttgttcatgaagatacattc
agattcatcatcagcaatggattgaggacgaagcatgggacattcaagatcttcttggag
gcagctgaccaggctttgcccacactatctaggaacacggggttaagattaatggaagga
gctacagcacttcttacgcctgatgtcctgcagctttcagacccagatactgcgaaagaa
aaccttaccttcctcttggctcagctcccccagtacggtcatctctattttcgtggggtt
gtgctactgcagtacaatttcacacagcaagatgtggacaacagggatgttgcatacaag
caccgaggtgggaattcccagattgacagatttacatttgttgccacagataggactaat
caaggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccattcaggtg
gatcatttggacaaaatggcaccaaaaattattcatctccattgcttttctgatgtggaa
ctgctgaagaatggaaattatgggatctatattactgccaggtacctgagggcatctgac
cccaatacagaagatgacaaaataatttttaagattttgcgaggtcctcattatggatac
ctggaaaatataacaacaggtggattcattcaggaaggatttagccaaaaggatctaaac
agcaaaatcatactttatgtcatcaaccaatcacgagaagcaaattctgacagtttggag
tttcaagtgacagatgccagcggaaactctgcggtgccccaaaggctggagctacggtgg
tctcggattgaaatgctacagactgaatatgaggtgtgtgaaaacatgggactggtgtcc
ctgaaaatcaccagggcaggacactcggtggagcctgcctttataaccgtgaaggtcaat
gaaatatctgctaggctggggaaggacttcacagtgactccctccaagcttgttcagttt
gatccaggagtgtcaaccaagatgtggaatatagcaattacctatgatggattagaggaa
gacgatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggcacacgg
acaaaagctgtagtgaaaattttggactcaaaaggaggccaatgcagccattcccgttct
tctggccaaagcaagcatgacttctggggaagacacacgctgtttccagtttcctcgggc
tcctcatcaccttccaggcctggcagtgtttccttggaagggatcccactgcctccttcc
aaagggatgacagagcatggaggggaccggtggcaggagcacagcttggcaaatcagtca
aggaccaggctgagagtaactggaaatggcagaatagttcatccttcatctgtatttaga
aatgaaacagatgttgttttcaaatatcatgggattgtatcactcaaaatagaggatgac
atctcctcagctgaaaccaacaagaaggcacaactacagataaatgtcatctcctctagg
aaggcagaaatcccacaggctgataaggcagaacttgcatctgaaccaagattgagacat
aaggacttttttcaaaaggcctgtacaccagatttaaagggcctcttgcattatgaagaa
agcactcaaaagttgtttcagtgtgatgggataacatggaaattctggaattcccaaagc
aaggaggtaaccatgaagaaatgtccctccggatggagttatcatgagggcagctgctac
ttcctggtagtgaatcacaaggtcacctggaacactgctgctcgggcttgcagagaacaa
tacctggggagtctaacaagtgtggctaatgaacaacacatgcagtggctgtgggacttc
agtgggaggatgcccttttggataggtttgaatgaccaagtcaatcctggacattgggag
tggaatggaggagaacctgtaacctacataaactggagaagaagctcctaccactttcca
atgagaggaagaaactgtgcatttgtgcagaagcgaggaaaatggcaagcaactgactgc
aagaaggtcaaaccaagcagctatatatgttcaagaaagttctaa
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integrated database retrieval system
