Corvus cornix (hooded crow): 104685204
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Entry
104685204 CDS
T03546
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104685204 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104685204 (MLH3)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104685204 (MLH3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
HATPase_c
DUF5638
Motif
Other DBs
NCBI-GeneID:
104685204
NCBI-ProteinID:
XP_010391304
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Position
5:23183774..23191578
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AA seq
1127 aa
AA seq
DB search
MIKRLVEDVRARLRSGVTVNSLGQCVEELVLNSIDAKATCIAIRVDLEAFKIQVVDNGSG
MGKEDLKAIGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTF
MKLFHNGQALEVCETELNRPSGGTTVTVCNLFHQLPVRRKCMDPALEIERVRQKVEAVSL
MHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSIPASRQASSSPGCHRCG
PELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHLFIEPCS
EDIREFNEDNDFSLHNAPVLKPSILDEKSIQESFKKACNEIVDSYEMCTLQSKDVKRKSI
TQKKSSSLMESSKNIQETANAPIQNTAESSDPCRNNKAEIPLPSKDDTVSNLIKSNTSEQ
EPKYTNSSQKVFDTHLKPSEHLRSSFSGGARSEIRDDCGDLGDCAENNIKDVGSQQGQVI
RESSKVRVLNKDVIQSLPEREDPTETAVGPETVCGSSLMRLCNERRNRETAEVIDDARRG
AVSSIPLKLCLTGLIRSVMQNEPPRDYEQTETSLQLNTQCRPGPVSAKDIFGHKVNVVIQ
SSNAKGISGNTNKEYTASFTREVCMTDGNENKPLSHQVREKIAMPTATNKRPYETLNDTE
LPQATSSGIPCKKIVIKTTRKQIAVPRPQPSKKLSLSTQLGSLEKFRRYYGRIKSRLPTP
MSEQSEFHLPVLSSETKSDFSKNENDNHDNFSSCETPPAEDADSNNTSQGFGSLEKTLFC
SGELSQDKRALCQSPLTLSDYSLVSNKNTSCKRSSGSLSSKLSRMKTDHKEVEQLGEQFQ
TDSNRKDDHSFDLESSNDFLYNVCQTYKSSLEKVRESKSSISNGPACSQSDGVIAESMKS
PVNSSPVSSIEGEYTVSSGTVLSLPAKNDCTNIICNDKSTLGESSEQNMKGTEVPHETSQ
RNLEFSADNTSTANPRNDSCCSVWLQDFDALSGKTIYINKATGLSTYNTPPSEGFQTACV
QDITTMAVNVVSKNAPFLILLVRRIILIMSLPSLKSHLHWSKSVLTL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgtttggtggaagatgtgcgagccaggctgcgttctggagtcactgttaac
tcacttggacagtgtgttgaggagcttgttctcaatagcattgatgccaaagcaacatgt
atagctatcagggtggatttggaagcttttaagatccaggtggtggacaatggctctggg
atggggaaagaggacttaaaggctattggaaagcgctacttcaccagcaagtgcagttca
gtgagagacttggagaacctgactttctatggcttcagaggagaggctttggcaagtata
gccaacatggccagtgtagtggaaatctcatctaagaccagcaggacagcaaaaacattt
atgaaactgtttcacaatgggcaagcactggaagtatgtgaaactgaattgaacagacca
agtggtggaactacagtcacagtgtgcaatctgttccatcagttaccggtgaggagaaag
tgtatggatcctgcgctggaaattgagagagtgagacagaaggtagaggctgtttcgcta
atgcatccttctgtttccctttctttaagaaatgatgtttcttgttctatggtgcttcag
ctccctaagacaagagatgtatactctcggttttgtcaaatttatggactgggcagatcc
cagaagttgcgagaaataaatcacaagtctggaggatttgagataagtggttttattagt
actgagggacattacaataagaatatgcagttcttgtatgtgaatagaaggcttgtttta
aagacaagactacataaactaattgattttttattaagaaaagaaagcgtaatttgcaag
gcaaaaagtatccctgcaagccgacaggctagttcaagtccgggttgccatcgctgtggg
ccagagttgtacgggatctttattctcaacgtgacctgtgcgtacagtgactatgatgtg
tgcctggaacctgcaaagactctgattgagttccagaactgggatgttcttctaacttgc
atagaggaaggagtgaaaatattcttgaaacgagagcatttatttattgaaccgtgtagt
gaggacatcagagaatttaatgaagataatgacttttctttgcataatgccccagttctg
aagccttcaattcttgatgagaagagcatccaagaaagttttaagaaagcatgtaatgaa
attgttgattcctatgaaatgtgtaccttgcagtcaaaagatgtcaagaggaaatccatt
actcaaaaaaaaagttcaagtcttatggagtcaagtaaaaatatacaggaaactgcaaat
gccccaattcagaacactgctgagtcatctgatccatgtagaaacaataaagcagagatt
ccattgccaagcaaagatgacaccgtttctaatttaattaaatctaatacctcagaacag
gagccaaaatacactaacagttcccagaaagtatttgatactcatttaaaaccttcagaa
catcttcgttcctctttcagtggaggggccagatcagaaataagagatgattgtggtgac
ctaggggattgtgcagagaacaatataaaagatgtgggcagccagcaaggccaagtaata
cgggaaagcagtaaggtccgtgtgttaaataaggatgttattcagtcactgcctgagaga
gaagaccctactgaaacagcagtgggacctgaaactgtctgtggaagttcattaatgaga
ctgtgtaatgaaagaagaaacagggaaacagctgaagtgatagatgatgccagacgaggg
gctgttagttcaataccattaaagttgtgccttacaggcctcataagaagtgtcatgcaa
aatgagcccccacgtgactatgaacaaacagaaacaagtcttcaattaaacacacaatgt
aggcctggccctgtcagtgccaaggatatttttggccacaaagtgaatgttgtgattcag
tcttcaaatgctaagggtatttccggtaatacaaataaagaatatacagcttcttttacc
agagaagtatgcatgactgatggtaatgagaacaaacctttgtcacatcaggtgagggag
aagatagctatgcctactgctaccaataaaagaccttatgaaacattgaatgatacggaa
ttgccgcaggcaacttcttcaggtattccttgcaagaaaattgttattaaaaccactaga
aaacagatagctgtgccaagacctcagccctctaagaaactgagcttgtccacacagctg
ggatcattagaaaagttcaggagatattatgggagaatcaaatctaggctaccaacaccc
atgtcagagcaaagtgaatttcatctcccagttcttagttcagaaactaagagtgacttt
tctaagaatgagaatgacaatcatgataacttcagcagttgtgaaactccacctgcagaa
gatgcagattctaataatactagccaaggttttggttccttggaaaagactttattttgt
agtggagaactgtcacaggacaaacgagccctttgtcagagtcctttgacattgtctgat
tactctctggttagtaacaaaaatacaagttgtaaaagatcttcaggatcattatcatcc
aaactatccagaatgaaaactgatcacaaagaagtagaacaacttggtgaacagttccaa
acagactcaaatagaaaagatgaccattcttttgatcttgaatcctcaaatgattttttg
tataatgtttgtcaaacatataaatcctcgttggaaaaagtgagagaatctaagtccagc
atttctaacgggcctgcgtgctcgcaatcagatggtgtgatagcagagtctatgaagagt
cctgtcaactcatcaccagtcagcagtatagaaggagagtacacagtctcttcaggcact
gttttatcattacctgctaaaaatgattgtactaatataatctgtaatgataaaagtaca
ttaggtgaatcctcagaacaaaatatgaagggtactgaggttccccatgagacctcacaa
aggaacttggaattctctgccgacaacacaagcacagccaatcccaggaatgattcctgt
tgttctgtctggctgcaagattttgatgctttatcgggtaagacaatatacatcaataaa
gcaactggactgagcacctacaacactcctcctagtgaaggatttcaaactgcctgtgtt
caagatataacaacaatggctgtgaatgttgtctcaaagaatgcaccttttctgatacta
cttgtcagaagaatcatattaataatgtcgctgccaagtctgaagtctcacctgcattgg
agcaagtcagtcctgactttatga
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