Corvus cornix (hooded crow): 104685208
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Entry
104685208 CDS
T03546
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104685208 (DENND4C)
Membrane trafficking [BR:
ccw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104685208 (DENND4C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
104685208
NCBI-ProteinID:
XP_010391287
LinkDB
All DBs
Position
Z:complement(57134422..57208038)
Genome browser
AA seq
1954 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSTGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYRRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLIFRYPQENYESFPLSDSVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQSQLGLLKTVE
RKVITSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLKKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMIELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDVDSVEDVRLIELDESQKSEHTVFIMPPEPPADDGQDRVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPSQWAKCLFSHS
YSLWFICLPAYVRVAHPKVKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESSWPSSNRSGIFLWTKVRNVVRGTAQFRQCL
KKSTQSLRMPVISALRSPTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSVDNHS
STADCQSDQGYRSKDELLRDGVDSLPPTETQVEKDLSSNTEDLIGEVSTEKSYEKQQLNS
ETPSPADPPAWGNSIVKVPSGIFDSSGRKSSGETVSSPLFITQDLVEDVVFGNVSPKKTS
EKRQKRQKLFSERSCSFSSESRAGMLLKKGSLDLHSKEIAIMMGEDAKILTAALSGAKTS
PCHMNKSHSFENIPDQQVSDISGTWSCVTESDWDLEHRSLPVLEEPGEGQEHLENGRDGN
MTTVADMNHEQSAESENLKPEAKDATAKRNSFYGVVKPIEREDVEVGLDPLSLLATDSTQ
PGYPEPGEKLVSPVAARNLADEIESYMNLKNPLGSKFPSMELHKLDKESDASGILGHSQE
RRSSLPLDPILPSPKCYENRRSPSVSRSKTFTGRSKQQSHPQVQKERSSSLTGLGRSSPH
GSLGTVVTTLSNLKLDNILSGPKIDVFKSGMKQAANVASKMWGVVTSAYSYSDDEEESHR
PDCNFPVGFEDNILGDNLLSRTGVSGLLTNELAQSTTSLGSSSSGGDVGRLHYSAGEVSF
PKSMKVLDSEKSEHSSSHNTSLSSIFQNYAMEVLMSSCSQCRACDALVYDEEIMAGWTAD
DSNLNTTCPFCKSTFLPFLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEQKLL
TSPAVDDLISFSDHLQSSHTIAEETSSAAEQGEVAEEKTIDPTTMETRANSPPKRGVSLT
RSHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEAVDPLIKRPNPAPVSVPYLSPLVLHKE
LESLLENEGEQVIHTSKFINQHPIIFWNLVWYFQRLDLPSNLPGLILTSEHCNDGVQLPL
TSLAQDSKLVYIHLLWDNINLHQEPGEPLYISWRNLNSSEKKPSTLAEDQQATNTLLENI
KLSIQHNDVIKPINLLLQKVKPDMKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAL
KKLPEEVLEKMQKIDAPPSSRVECCRKCFGAPLI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccgcgagtggctgactatttcgtggtggcagggctcactgat
acagacacagcaaccctcctggaccaagaaataagccgacatgaaacaaagtcaactggt
cccaaggctccaattactgacattgctgtgataattaaatcagctggtgaaactgtccca
gagggatacacctgtgttgaagccacccctacagccctccaagccaacttaaactatgga
agtctaaagagtcctgaactttttctttgctacaggagaggccgggacaaaccacctctt
actgacatcggagttctgtatgaggggaaggaacgcataatttcgggctgtgaggtgatt
caagctactccgtacggtcgttgcgctaatgttaacaacagctcggcttcttcacaacgc
atcttcatcacctaccgaagggcccctccagtgcgacctcagaactcactggcagtgaca
gatatctgtgtcattgttaccagcaaaggggaaacccctcctcacacattctgtaaagtg
gataagaatttaaattgtggtatgtggggttccagtgtatacctttgttacaagaaatct
gtgccagcttctaactctttagcatataaagctggcttaattttcagatatcctcaagag
aattatgaatcatttccactgtcagactctgtacctctcttctgccttcctatgggagct
actattgagtgctgggaccctcaaaccaaatatccactaccagtgttctcaacatttgta
ctgacatgctcttctgcagaaaaggtttacggtgctgctatccagttctatgagccttat
cccagggagctgctaacagaaaaacagcaatcgcagctgggtcttctgaaaactgtagag
agaaaagtgattacttccaagtccatcaattcaaacaaatgcatctgtcttctctcacac
tggcctttctttgaagcatttagaaaatttcttatgttcatctacaaactctctgtctct
ggacctcatcctcttcccattgaaaagcatatatcccattttatgcacaatatacctttc
ccttcaccacaaaggccaaggattcttgtgcagctttctgcccatgatgcattaatattg
tcacagccagtttctacaccattgccattaagtggagcaaactttagcactctgctcatg
aatcttggaccagaaaactgtgccactctattactttttgtattactagaaggcaagatc
ctcctccattcccttagaccagctgtgttgacaggcgttgctgaagctgtagtagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgatctgtac
gatccaccacaggatattgtgtgcattgacttagacacaaacatggtctacatatcagat
gataagaagagcaccaactggaagcagtttcctaaaaagccatgtaaaagtctgcttagc
accttaaagaaactgcacccacagctggcagcagttcacaggaaaactcaagaaggctct
gcagtggaaatgactcctatagaagcagacttttcctggcagaagaagatgatagaactt
gagatggagatccaggaagcatttctccgtttcatggcatctattttgaagggttacaga
acattcctcaagccaatcacacaggcaccttcaaataaagcaactgctgccgattccttg
tttgatcatcaaggatttttaaaaagcagagaccgtgcctatacaaagttctacacgcat
ctcaccaaaacacagatattcagccgctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataaaggaacg
gaaaaaggagagaaggttgatgtagattctgttgaagatgtacgcttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgttcataatgccaccagaaccacctgctgatgat
ggacaggaccgagtgccaaaatacagctataagaacttcccgcgactagatttcaagctc
tttgacaggccacaggagctcaagctctccttcagcagacacccagctggaagcagcatt
tcaaatagtccagcactcatggcaaagaggacaaagcaggagataaaaacagcccataaa
ttagccaagaagtattatgtcagcccttcccagtgggctaagtgtctcttcagtcatagt
tacagcctatggtttatttgtctaccagcctatgtcagagttgcacatcccaaggtcaaa
gcactgcaacaggcatatgatgttctgattaaaatgaggaaaacggatgtggaaccacta
gatgaggtctgttacagagtagtaatgcagctctgtggactgtggggtcagcctgttcag
gctgtgagagtcctttttgaaatgaaaaatgctggaatacagccaaatgccataacctat
ggttattacaataaggctgttttagagtcttcttggcctagtagtaaccgcagtggcata
ttcctgtggacaaaggtacgaaatgtagttcgtggcacagcgcagtttaggcagtgctta
aagaaatcaacgcagagcctacgaatgcctgtgatatcagctctgcggagtcccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacaccctcttcgtcagtgacttagtcaggcttgattccgttgataatcactct
agcacagcagattgtcagtcagaccagggttacagatccaaggatgaacttttgagagat
ggtgtggatagtcttcctccaactgaaacacaagtagagaaagatctttcttctaacact
gaagacttaataggagaggtttctacagaaaaatcttacgaaaagcaacagctgaattca
gaaactccaagtccagctgatccacctgcttggggtaacagtattgtgaaagttccatct
ggcatttttgatagcagtggaaggaagagcagtggtgaaacagtttctagcccactgttc
ataactcaggatttggtcgaagatgtagtctttggtaatgtttctcctaagaaaacaagt
gaaaaaagacagaagaggcaaaaactgttttcagagagaagctgcagtttcagcagtgaa
agcagagctggaatgctgctgaaaaaaggcagcttggacttgcattctaaagaaatagca
ataatgatgggagaagatgccaagatcctaacagcagctttatctggagccaaaacttca
ccctgtcatatgaataaatcccacagctttgaaaatatccctgaccagcaggtttctgac
atcagtggcacttggagttgtgtgactgagagtgattgggacctagagcataggtcttta
ccagtgctggaagaacctggggaagggcaggagcatcttgagaatggaagagatggaaac
atgaccacagtggcagacatgaatcatgaacagtcagctgagtctgaaaacctgaaacca
gaagccaaagatgcaactgctaaaagaaatagcttttatggagtggttaagcctatcgaa
agggaagatgttgaagtaggcttggaccctttgtctttgctagctactgacagcacgcaa
ccaggttatccagaaccaggggaaaagttggtgtcaccagttgcagcacgaaatttggca
gatgaaatagagagctatatgaatttgaagaacccattgggtagtaagtttcccagcatg
gaactgcacaagctggataaggaatcagacgcttctggtatacttggtcactcccaagaa
aggagatcaagcctgcctttggatcccatcctgccatcccccaagtgttacgaaaatcga
agaagtccttctgtctccagatccaaaacattcactggacgatcaaagcaacaatcccat
ccacaagttcaaaaggagcggtcttcatctttgacaggactgggtcgttcttctccacat
ggctcattgggaactgttgtaacaactttatccaatctgaagttggacaatatattgtct
ggaccaaaaattgatgttttcaaatcaggcatgaagcaggctgccaatgtggccagtaag
atgtggggagttgtaacatcggcttatagttactcagatgatgaggaagaaagccatcga
ccagactgtaacttccctgttggttttgaagataatattttaggagataatctgttgtca
agaactggagtctcaggcctgcttacaaatgagcttgcacaaagcactactagtcttggc
agtagcagcagcggtggagatgtaggaagactgcattacagtgcaggtgaagtttcattc
ccaaaaagtatgaaagttctagattctgagaaatcagagcacagctcttcgcataatact
agtttatccagcattttccagaactatgcaatggaggtcttgatgtcaagctgctctcaa
tgtagagcttgtgatgctttggtttatgatgaagaaattatggctgggtggacagcagac
gattcaaacttgaacactacatgccctttctgtaaaagtaccttcctacctttccttaat
gttgaatttaaagaccttcgtggctctgcaagctttttcctgaagcaaagtacctcagga
gatagtttacagagtggtactctaccattaaccacggatcccctggagcagaaactgttg
accagtccagctgttgatgacttgatcagtttttcagatcacctgcagtccagccacacc
atagctgaagaaaccagctctgcagctgagcagggtgaagtggcagaagagaagactata
gatcccacaaccatggagacacgtgccaatagtccaccaaaaaggggtgtgtccttgact
cggagccacagtgttggaggtccactgcaaaacattgatctttcccagagaccgtctcat
ggcatttcaacagttagtcttccaaatagtttgcaggaagctgtggatcctttaataaaa
cgacctaaccctgcccctgtatctgtaccctatttgagccctttggtactgcataaggaa
cttgaatcactgttggagaatgagggagagcaagtaatccatacatccaaatttatcaat
caacaccccataatcttctggaacctagtctggtatttccaacggttggatctgcctagc
aacttacctggactcattctgacatctgagcactgcaatgatggcgtgcagcttcctttg
acatctcttgctcaagatagcaagctagtatacatccatcttctatgggacaatatcaac
ctccaccaagagccaggggagcccctgtatatatcttggagaaatctcaattcttctgaa
aagaaaccctccacactggcagaagatcagcaggcaacaaacactttgttagagaacatc
aaactaagtattcaacacaatgatgttattaagccgatcaacctcctcctacagaaagtt
aagccagatatgaaacgacagaggagtttttacagggaaattcttttcctgtctctggtg
tctcttggaagagaaaacattgacattgaggtctttgatagtgaatacagacttgcactt
aaaaaactaccagaggaagttcttgaaaagatgcagaaaatagatgctccaccaagcagc
agggttgagtgttgcaggaagtgctttggagcacctttaatataa
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integrated database retrieval system
