Corvus cornix (hooded crow): 104685236
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Entry
104685236 CDS
T03546
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104685236 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104685236 (TTC37)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104685236 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_11
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_9
ANAPC3
TPR_6
TPR_15
ARM_TT21_C
BTAD
HAT_Syf1_M
TolB_N
TPR_30
TPR-S
Fis1_TPR_C
TPR_20
Retrotran_gag_2
TPR_5
Motif
Other DBs
NCBI-GeneID:
104685236
NCBI-ProteinID:
XP_010391356
LinkDB
All DBs
Position
Z:52910515..52960700
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQIDVKGDLAHVYQKLLELYESGDKQKWCDVCN
KLVELYYQEKKYSEVAETWQKLIQMKQEEGAEKAELHQLWKKMIQLLKDSTRNQDNKTGQ
LLLTAFEHALNSADVVPGEDHQNLYKDFIQCLSKFPHEVARLEKACHDMMALYPTMSYPL
EVLCLHFIHSGTSSEKALHCFSRLLEMDASSGPGIIGFGIKCLKEKKYKEAVKSLTEGLQ
KTNQCPAAWHYLAEAQMKIHEHRNAVLSCNQALEALGTPEGPNLRWKNLALQLKAETLIK
IADADAAEEAIKALEQTVDASSDPVVSALRGQAYLNKGLMDQASKISQELLLSHPDLAEA
HALEGFIHYSQKNYEQAEKSFLSAIEKKAGTAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKFDSYLGSAFCYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGTAAVNLSMELG
DMDTALSILNEVTGKARPGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLVYSIYRAAALEQILGKYENAIATYQQILKKT
ENYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALAYFTRAVKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNATKQMLKKNDLLVLGGRCYGRALKLMPLPSIWCDL
GINYYRQAEYLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINIVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELNMHTEGAKGYAHWVCSTLQDKANRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDPSAFTMFGFLNEYLHLKQQATCAYERAASLLKNSEDTEKYNTA
VQNYGRSLCALGRCDEAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESIKAYEKALSVAE
SEEDKAHILTALAIIEYKLNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGNGGIYERCLIASAVYALQGRNVAIQREVSKAIHSYPDNPALWSLLSRLV
PLYASKKPEGGAVAGGVAHTLDVNCGKEVLLNIAVNQLVAGCHMLEDKKNNPLKNIQKAI
HVCPDNPAAWAVLMAACHAENTVVCLNNTEPKRTGLEMTLVSTVSAKTGETNLPHNYVHT
LEDWCLCQAITSLEETGKLSEAEALCNKGLKSCPEHPTLFLLLRQVQCKQLLQTHKELPD
NIVEELRKTVMSSSSSAAAWQWLAKVYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSPCPLAALLQALLQYNRKMGARETRR
MLERIVYQPANPKTIVSVARWYLLQHLYAKDDCELIDVLIENAKANGDVRALELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaagtgaaggcagccttaaaaagtgctagagatgccataagaaataaa
gagtataaggaggcattaaaacattgcaaggcagtcttgaagcaagaaaagaataactac
aatgcttgggtattcattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttgctggcatggcagggatta
gcaaatttatatgagaaacccaaccaaatagatgtcaaaggagacttagcacatgtttac
caaaaactcttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggagctatattatcaagaaaagaaatattcagaggtggctgaaacttggcag
aaactaatacagatgaaacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttactgaaggacagtacaaggaaccaggataataagactgggcag
ttgcttttgaccgcatttgaacatgcgctgaactctgctgacgtggttcctggtgaagac
caccaaaatctttacaaagacttcatacagtgcttgtcaaaatttcctcatgaagtagct
aggttggaaaaggcctgtcatgatatgatggctttgtaccctaccatgagttatcctttg
gaagtactttgcttgcactttattcattcaggtacttcgtcggaaaaggccctgcactgt
ttctctcggcttttggagatggatgcgagcagtggtccaggcatcattggttttggtata
aaatgcctcaaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactaaccagtgtccagcagcatggcattatttagcagaggcacagatgaagattcac
gaacacaggaatgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgag
ggtcctaatcttcggtggaagaaccttgcccttcagttgaaagcagagactttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagaccgtagatgca
agcagtgacccagtggtttcagctctcaggggtcaggcttatctaaacaaaggtttaatg
gatcaggcttcaaagatttcacaagagcttctgttgtcccaccccgatctggctgaagcc
catgctttagagggtttcatccattattcccaaaagaactatgaacaggcagaaaaaagt
tttctaagtgctattgaaaaaaaggctggaactgcagagtatcatcagtacctgggactc
acatactggttcatgagtgatgagacaaaaaaagacaaaggaaaagcactcactcagttt
ttgaaggcggcaaaatttgacagctacttgggaagtgccttttgttacctaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgagacggatgaagaatctggaacagcagctgtaaacttaagcatggaacttgga
gacatggacactgctctgtcaatcctgaatgaagtaactggaaaagcaagacctggtaca
gcaaaatgggcctggcttcatcgtggactttattacctgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgaacagaggtagctactcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccaggacttgtgtacagcatttacagagctgcagcgcttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaacaaattttaaagaagaca
gaaaactatgtgcctgcactgaaaggacttggtgagtgttacctcatgctggcaagatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggcccttgcatat
tttacaagggcagtaaagcaccgtcctgatgtatcttgcctctggaaactgttgggagat
acctgtactagtgtgcatgttatttcgccaaccaaagtgaatgttcaagtactaggatcc
cttctgggtaaaaatgcaaccaaacagatgctgaagaaaaacgatcttctcgtactgggg
ggaaggtgttatggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcggagtacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctagagaagtctttgcagtgtctcaaaaaagctgtgagacttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcttgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatattgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccgtcttacttgttgtgttggattggacaggca
cttattgcagagaccgtaggcagctatgatactatggatctcttcaggcacacgactgaa
ctcaatatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaagccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctata
ccagcagcccaagtggtcttgagcaaatatacagaaagaaatccagatgatccttctgct
ttcacaatgtttgggtttttgaatgagtatctacatctaaaacagcaggcaacctgtgcc
tatgagagggcagcttcactgctgaaaaactcagaggatactgagaaatacaacacagca
gtgcaaaactacggcaggtcactgtgtgctcttgggcggtgtgatgaggccattgaagtt
tacacatcaatacccctaactgagtttgatggcattgtggggctagcgttagcttacttc
aagaaaggactattagaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaagaagataaagcacatatcctgactgccttggcaataatagaatataaactgaac
aaagtggatgctgcaaagacactgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactgggattggtgaagcaggatgcaacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaagggaatggtgggatttatgagagatgcctt
attgcatctgctgtttatgcattacaaggtagaaatgtggcaatccagagggaagtctcc
aaagcaatacacagttaccctgataatcctgccctttggtctcttctgtctcgactagtt
ccactgtatgcatcaaaaaagccagaaggaggagctgtggcaggaggtgttgcacataca
cttgatgtaaactgtggaaaggaagtcctgctgaatattgcagttaatcagctggtagca
ggatgtcacatgttagaagataagaaaaacaatcctctgaaaaatattcagaaggccatc
catgtctgtccagataatcctgctgcttgggcagtgctaatggcagcctgtcatgctgaa
aacactgttgtctgtctaaacaacactgaaccgaaacgaacaggtctagagatgacactt
gtgtctacagtttcagccaaaactggagaaactaaccttccgcataattatgtccatact
cttgaagactggtgtctgtgtcaagctattaccagtctagaggagactggtaaactgtca
gaagctgaagctctttgtaacaagggtctaaaaagctgccctgagcacccaactctgttt
ttgcttttgagacaagttcagtgcaagcagctgttgcagactcacaaagaacttccagat
aacatcgtggaggaacttcgtaagacagtcatgtccagttcatcctcagctgcagcatgg
caatggctggcaaaagtatatcagtctcagagaatgatgacaggagcagagatgtgctac
agaaagagtctgcagttggcatcccagcagggcagctggaatgggaagttatccagtctg
ctcaggctagctatgctcgcactggaaatctgcatggctaatgtctcaaatgaacattgg
ccctcattggttcaggaggcaacaaccgaagctttgaaactttctccttgccccttggca
gctctgcttcaagcactgctacagtataatcgcaaaatgggagcaagggagactcggcga
atgttggagagaatagtttatcaaccagcgaatcccaaaaccattgtgtcggtggcacgc
tggtatctcctgcaacatctgtatgccaaagatgattgtgaactaatagatgtacttata
gaaaatgccaaagctaatggagatgttagagctctggaactaaatgagaaattgtcagca
agtgcatag
DBGET
integrated database retrieval system
