Corvus cornix (hooded crow): 104685293
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Entry
104685293 CDS
T03546
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104685293 (TMC1)
03037 Cilium and associated proteins [BR:
ccw03037
]
104685293 (TMC1)
Transporters [BR:
ccw02000
]
Other transporters
Pores ion channels [TC:
1
]
104685293 (TMC1)
Cilium and associated proteins [BR:
ccw03037
]
Other cilia and associated proteins
Stereociliary proteins
104685293 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Motif
Other DBs
NCBI-GeneID:
104685293
NCBI-ProteinID:
XP_019137420
LinkDB
All DBs
Position
Z:51593374..51677793
Genome browser
AA seq
947 aa
AA seq
DB search
MTKQDKSTEGNDGSDDNEEGSAVENEETVKGTGRKRATPRTRRGRARGRDRHGDEEDEDD
EDGTRRAGHRRHRNRRRGRPAGNEASDSDMEPAKSRKNQENQKSKEDDEEEEDEKGGKSG
KGKNEKEVDKKADKKGKKEKANKKKKDKKKSGSGSDSESEEEPITEEELAKLKEEVEEKK
KLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWMKFQRDF
ENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGKP
YGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMPLSYFLV
GVGSIGYSFMIVTRTMAKNANDDGGGDDTSFNFSWKMFTSWDYLIGNPETADNKFASITT
SFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQQFALEGLEN
YGWWERNEVNTVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNLYTFIIA
LMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWETMVGQE
FVRLTVSDMMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNVLGLIFN
QGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYMAMLLFI
LFLSTLPAVYTIVSIPPSFDCGPFSGKTRMYEVISETLEHDFPSWFGKVFGYASNPGLIL
PFILLMVLSLYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQEENPFETE
PPQAKPKGDKQDESTPNKDSKKGQDGNESKKTAQPQEVSSSQILQHPGPALNGHYPPQGR
GGNLPPPSIAVTRPPGPRRPGVPGYPPGNPCLPGMQPGIPRGPPLYR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacaggacaagtcaacagaaggaaacgatggaagtgatgacaatgaagaaggc
agtgcagttgagaatgaagaaactgtcaaaggaacagggaggaagagagcaacaccaaga
accagaaggggacgtgccagagggagagataggcatggtgatgaggaggatgaggatgat
gaagatgggacaaggagagctgggcatcgcaggcacagaaaccgtagacgaggacgacca
gctggaaatgaggccagtgattctgatatggaacctgcaaaatccagaaagaaccaggaa
aatcagaaatccaaggaagatgatgaagaagaggaagacgagaaagggggtaaaagtggg
aagggtaaaaatgagaaggaagtggacaaaaaggctgataaaaaagggaaaaaagaaaag
gccaacaagaagaaaaaagacaaaaagaaatcaggatcaggctctgattctgaatctgag
gaggaaccaattacagaggaggaactggccaagctgaaagaagaggtagaagaaaaaaag
aaactcattgccacactacgaaacaagccatggaagatgaaaaagaagttgtctgtcctt
aaggaagcacagctttttgttgaaaagtttgaaggtgctcttgggaaaggaaaaggaaaa
aaattctatgcatacaaagtgatgatgaccaagaaatggatgaaatttcaaagagatttt
gaaaattttaagacagcctgcataccctgggaaatgaaaattaaggagattgaaagtcac
tttggctcatcagtagcatcttatttcatattcttgcgttggatgtatggaataaacatg
attctctttggactgacctttggtcttgtaatggtgcctgaggctttgatgggtaagcca
tatggctctttgcctagaaaaactgtcccaagagctgaagaagcaactgctatgaatttt
gctactctctgggattttagtggctttgcacagtattctgtactcttttatggttattac
aataaccagaggacaattgggtggctcaagttcaggatgcctctttcatatttccttgtt
ggagttggatctattggctatagctttatgattgtcactcgaacaatggcaaagaatgca
aatgatgatggtggtggggatgacactagttttaacttcagctggaaaatgttcacaagc
tgggactacttgattggcaatcctgagacagcagataataagtttgcctccatcacaaca
agctttaaggaagcaatcgtggaggagcaggagagccgaaaagaagaaaatattcatttg
actcgattcctgagggtacttgctaacttcttagccctatgcacacttgctggaagtggc
tacctcatcttttttgttgtcagaagatcccagcaatttgccttggaaggtctggagaac
tacgggtggtgggaaagaaatgaagtgaacacagttatgtcacttttgggaatgttctgt
ccgactttatttgatgtaatcagttctctggaaaattaccaccctcgaatagctctgaga
tggcagctgggaagaatctttgctctttttcttggcaatctctacactttcattatcgcc
ctaatggatgagatcaacctcaagttggaagaagaaaagatagtcaaatataacatgaca
atatgggaagccagtctgtacaatggcactattccagagaattcaactgctcctccaata
caggtagaccctgctgatgtccccagagggccatgttgggaaacaatggtgggacaggaa
tttgtgcgcctgacagtctctgacatgatgacaacatacatcacaattttaattggtgat
tttttgagagccgtctttgtcaggtttttcaattactgctggtgctgggacttggagtat
ggatttccatcatattctgagtttgatataagtggaaatgtgctgggactgatctttaac
caaggcatgatctggatgggatctttttatgctccatgtctcccagcaatcaatgtgttc
cgcctccacacatcgatgtacctgcagtgctgggcagtgatgtgctgcaatgtcccccaa
gaacgggtcttcaaggcttccagatccaataacttctacatggccatgctgcttttcatc
cttttcctctccacactgcctgctgtgtacaccattgtctccatccctccatcttttgac
tgtggtcctttcagtgggaagactagaatgtatgaagtcatatcagaaactctggagcac
gacttcccttcctggtttgggaaggtatttggttatgcctctaaccctggacttatccta
ccttttatattgcttatggtcctgagtctttattatctcaacgcgacatccaaatcctac
aaggaagctaacttggaacttaaaaagaagttacaaagtcaagcagaagaaaataaaaga
agaaataaacaaaaggcacaaaaatcaaatgaacaagaggaaaatccatttgagacagaa
ccaccacaggcaaagcctaaaggagacaagcaagatgaatccactccaaacaaagacagc
aagaaaggacaggatggcaatgaatcaaagaagacagcccagccacaagaagtcagctcc
tctcagatactccagcatcctggccctgccctgaatggccactaccctccacagggccga
ggaggaaaccttcctccaccatccatagctgtgacaaggccaccagggcccaggaggccc
ggagtgccaggctatccacctggaaatccatgcctcccagggatgcagccaggaattccc
aggggtcctcccctgtacagataa
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