Corvus cornix (hooded crow): 104685318
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Entry
104685318 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccw04054
]
104685318
Pattern recognition receptors [BR:
ccw04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
104685318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_14
LRR_5
LRR_9
LRR_NXF1-5
LRR_LRWD1
LRR_At5g56370
DHU1_N
LRR_6
Motif
Other DBs
NCBI-GeneID:
104685318
NCBI-ProteinID:
XP_039428404
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MCTPLLVMLVTLVMVPGGVFPYGFRNCIQAPWDPGLFRCIQRFLSTVEAAVGDLPSTATS
LNLSVNTLRQVPPGAFAHLPWLYTLDLTHNQLELLAPGAFWGLSALAHLDLAHNNMSVLA
TGVFIGLGNLSTLRLDHNPLQKVAPTAFWPLATLSMLWLRGGWLSALEPVAMAVGHLTHL
DLLDLCGNMLSTLGPGLPPTLRVLHLCNNSLGALSGATPGVMPPGLRVLDLSYNNISDPA
PLAHLCLHNLTHLYLAGNPLDVEQLLHMAGVSPRHVDVSGLQVGKRGLEYLCQQLTGPRL
QRLRLQHVGLTAMPDGALAKCPVLSALDVSGNRLRHLGCVGRLLTQAQRAALGELVAEHN
LLQRLPSCMGTPVLHQLHNVSLRFNRILVAGAGAFDNAPALRQLRLDVNGLARLDRAALR
GLHDLRHLRLDNNLLTDLLPGSFADLHQLEDLNLRNNRVAVLFPGAFKGLDHLQTLDLGG
NNLRHLAAMAFQGLPRLYRLYLDRNRLLEVSAAAFQPVQVTLGVLDLRANALRYLSRHLR
QPPPFRYLQNLYDLKLQAQQPYGMRVVPQRFFQGLSALRSLYLSQNSLSAIPADAFDDLA
QLQYLTLADSNGGMGHLPAGIFKNLSQLRSLNLESAGLRSLGPEVFGNLTQLKELRLAKN
ELRALDMTLATCLPALRYLDLRKCPLSCSCANAWLPGWLARGPVQVVYLYNYTCGETGGA
SAYLHCFDTRVCYLGMGLYLFAGTAPAVLLLLVLPLLHHRGYWRLRYQLFLLHAWARGRW
RREQRHYTYDTFVSYNSGDERWVLEELVPELERGALRLCLHHRDFRPGRAIVDNIVDAVY
NSRHTVCVVSRGYLRSEWCSLEIQMASYRLFDELRDVLVLVFLEDIPEAELSAFHHMRRV
LLRRTHLRWPPEPPAQPLFWAKLRCALSGGDEEEEERERGGREEECPGASGSPGEVLPQE
SNFLAQNHHFLSGEGALWSGNDGSKEEEEKEEKKRGGKERGCPEMTGTPVKVASQKSSFL
PQNHQLFSWECALDSGDEGNKREKEEEKEEEEVYYHVPQP
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccccgctgctggtgatgctggtgacattggtgatggtgcctggaggggtcttt
ccctatggcttccgcaactgcatccaggcgccatgggaccctgggctgttccgctgcatc
cagcgcttcctgagcaccgtggaggctgcagtgggtgacctcccctccactgccacatcc
ctcaacctctccgtcaacaccttgcgccaggtgccccccggtgcctttgcccacctgccg
tggctctatacccttgatttgacccacaaccagctggaactcctggccccaggggctttc
tgggggctgtcagcactggcccacctagacctggcccacaacaacatgtctgtgctggcc
acaggtgtgttcattgggctgggtaatctgagcacactgcggctggaccacaacccactg
cagaaggtggcccccacggctttctggcctctggccacactcagcatgctctggcttcgg
ggcggctggctcagtgcgctggagcctgtggccatggccgtggggcatctgacacacctg
gacctgctcgacctgtgtggcaacatgctgtcgacactgggcccagggctgccgcccacg
ctgagggtcctgcacctctgcaacaactccctaggagctctttcaggggcaacccctggg
gtgatgcccccagggctgcgtgtgctcgacctgtcctacaacaacatctcggaccctgca
ccgctcgctcacctgtgcctgcacaacctgacacacctgtacctggctgggaacccactg
gacgtggagcagctgctgcacatggctggagtctccccacgccatgtggacgtgtcaggg
ctgcaggtgggcaaaaggggcttggagtacctgtgccagcagctgacagggccacggctg
cagaggctgcggctgcagcatgtggggctcacagcaatgcccgatggagctctggccaag
tgtccggtgctgagcgccctggacgtgtctggcaaccggctgcggcacttgggctgcgta
gggcggctgctgacccaggcgcagcgcgcagcactgggcgagctggtggctgagcacaac
ctgctgcagcggctgccatcgtgcatggggaccccggttctgcaccagctccacaatgtg
tccctgcgcttcaaccgcatcctagtggctggtgcgggtgcctttgataatgcaccagcg
ctgcggcagctgcggctggacgtgaatgggctggcacggctggaccgcgcagcgctgcgt
ggactccacgacctgcggcacctgcgccttgacaacaacctgctcaccgacctcctgccc
ggctcctttgctgacctgcaccagctggaagacctcaacctgcgcaacaaccgagtggct
gtgctcttccctggtgccttcaaggggcttgaccacctgcagacccttgacctgggtggg
aacaacctgcggcacttggcagccatggcgttccagggcctcccgcggctttaccggctc
tacctggaccgcaaccggctgctggaggtgagcgcggcagcattccagccggtgcaggtg
acactgggcgtgctggacctgcgcgccaacgcgctgcgctacctgagccgacacctgcgg
cagccgccacctttccgctacctgcagaacctctatgacctgaagctgcaggcacagcag
ccctatgggatgcgcgtggtgccgcaacgcttcttccagggcctcagtgccttgcgctcg
ctctacctgtcacagaattcactctcggccatccccgccgatgccttcgatgacctggcg
cagctgcagtacctgacactggctgacagcaatggcgggatgggccacctgcccgccggc
atcttcaagaacctgagccaactgcgcagcttgaacctggagagtgcaggattgcgcagc
ctcggccctgaggtctttggcaacctgacgcaactgaaggagctgcgcctggccaaaaac
gagctgcgtgcactggatatgactctggccacgtgcctgcccgccctgcgctacctggac
ctgcgcaagtgcccgctgagttgcagctgtgccaatgcctggctgcctggctggctggca
cgtgggcccgtgcaggtggtctacctgtataactacacctgtggcgagacgggtggcgcc
tccgcatacctgcactgctttgacacgcgtgtgtgctacctgggtatggggctgtacctg
tttgcagggacagcaccggctgtgctgctgctgctggtgctgccactgctgcaccaccgt
gggtactggcggctgcgctaccagctgttcctgctgcatgcatgggcacgcgggcgctgg
cggcgggagcagcggcactacacctacgacacctttgtgtcctacaactccggggatgag
cggtgggtgctggaggagctggtgcctgagctggagcgcggagccctgcgtctctgcctg
caccaccgtgactttcgccctggccgcgccatagtggacaacattgtggacgctgtgtac
aacagccggcacacggtgtgcgtggtgagccgtgggtacctacgcagcgagtggtgctca
ctggagatccagatggccagctatcgcctctttgatgagctgcgcgatgtccttgtcctc
gtgttcctcgaggacatccctgaggctgagctctcagccttccaccacatgcgtcgtgtg
ctgctgcggcgcacacacctgcgttggcccccggagccccctgcacagcccctgttctgg
gcaaagctcaggtgtgccctgagtgggggagacgaggaggaggaggagagggagaggggg
ggcagggaggaagagtgccctggtgcatctgggagccctggggaagttctccctcaggaa
agcaactttctggcccaaaatcaccattttttatctggggaaggtgccctgtggagtggg
aatgatggcagcaaggaggaagaggagaaggaggagaagaagagggggggcaaggagaga
ggttgccctgagatgactgggacccctgtgaaggttgcctctcagaaaagcagttttctg
ccccaaaatcaccagcttttctcttgggaatgtgctctggacagtggggatgaaggtaac
aagagggagaaggaggaggagaaggaggaagaggaggtatattaccatgtcccgcagccg
tag
DBGET
integrated database retrieval system
