Corvus cornix (hooded crow): 104685421
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Entry
104685421 CDS
T03546
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104685421 (SMC6)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104685421 (SMC6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
TMP_3
BRE1
AAA_29
TPR_MLP1_2
THOC7
AAA_21
FtsK_SpoIIIE
RnlA_toxin_N
Crescentin
AAA_13
Motif
Other DBs
NCBI-GeneID:
104685421
NCBI-ProteinID:
XP_010391590
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All DBs
Position
3:complement(104084036..104123648)
Genome browser
AA seq
1095 aa
AA seq
DB search
MGKRKEESVSNRGSQKRQRKEYTHRLSDEPDEEETLEFSASSSASSQSPDGEVGIIESIQ
LKNFMCHSNLGPFQFGSNLNFVIGTNGSGKSSVLTALIVGLGGKATATNRGSSLKMFIQK
GETSADISITLRNQGRDAFKPESYGASITVNQHINQDGSRTYKLKSKCGAIISSKKEELI
GILDHFNIQVDNPVSVLTQEMSKQFLQTKNEGDKYKFFMKATQLEQMKEDYSFIGKTKKN
TRVQIEQGEERLEELKQVYLEKKEIFKSIAFVNDMQSRLKDLKHQMAWAVVSEMEKEIEL
LKEGVRAEEGNTEFLQKVEEWQVKVNEAEKKYKAIQDKLITVSEEAQALHPQCISLKAEV
QAKRKAVNETEIVYNRSKTELKRLGKDNEQLCKRIEELKSCANQVSEPEKLERQRRIAYL
REQLKAFHDEEIMIDQQVDQFQQAISKCREEHSRLKRENSDVQQALDAKQKQLRDLKDSK
TNTLKRFGPHIPAFLEAIEMAHKQGRFKKKPLGPLGALIHPKDPELILAIESCLKGLLQA
FCCDNHSDERTLQFLMSKYFARGHRPQIIVNKFQNKIYDTSQRAVRHPEFPSVLTALEID
DPVVANCLIDMRGIETILLIKNSRKAREVMQCNQPPKNCREAFTAEGDQVFERRYYSSSF
VRPRFLSQDVEAEISHLDGEIENKRAQLTASQQRLYSIENEIRQNEDHLYGHRRHQKQLQ
IKVRTANAEIADLENIEEHQSADVHILQDEVEENKSRMESVKQDMQLQSRKMEELENNLQ
AAEKQLEEVKEKIHQVEEIAGPIKAELNQAESEVENSKRRLQHYEDKQREHVACINKHKD
LLVAKGNELEEKMAKARQIFSERIMVTRTVKSLDAEMNRLREKINSESSHRGNREEIIQQ
FRYARERYEDASNKVKNLKRFIAVLDEVMTERLKVYRQFLRSLSMQCKLHFEHLLRVRGC
SGNIIFDHKNETLSITVQPREEEKASRSDLRSLSGGERSFSTVCFILSLWNISESPFRCM
DEFDVYMDMVNRRIAIDMILERADFQRHRQFILFTPLTMSSLPMSPHIRILRMPDPPRDQ
RTLNFQNRNNRDEDQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagaaagtgtttcaaatcgtggatcccagaaaaggcagagaaaa
gaatacacacatagacttagtgatgagcctgacgaagaagaaactttagagttctcagct
agtagtagtgcctcttcacagtcgcctgacggtgaagttgggataattgaaagtatccag
ctgaagaacttcatgtgccattcaaatttggggccgtttcagtttggatcaaatctcaat
tttgttattggaaccaatggaagtgggaaaagttctgtattaactgcactaattgttgga
cttggtggaaaagccactgcaactaacagaggctcctcattaaaaatgtttattcaaaaa
ggagagacttctgcagatatttccataactttgcggaaccaaggtagagatgcatttaaa
ccagaatcgtatggtgcctctattactgtgaatcagcacattaatcaggatggaagcaga
acttacaaactgaaaagcaaatgtggggccataatttcttcaaagaaagaggaactcata
ggaatactggatcactttaatatacaggtagataatcctgtgtctgttttaacccaagag
atgagtaaacagtttttacagactaaaaatgaaggtgacaagtacaagttttttatgaag
gcaactcagctggaacaaatgaaagaagattattcatttattgggaaaactaaaaaaaat
acccgtgttcagatagaacaaggggaagagcgtcttgaagaacttaagcaggtttatttg
gaaaagaaggaaattttcaaaagcattgcattcgtgaatgacatgcaaagtcgtctcaaa
gatttgaaacatcagatggcgtgggcagtggtgagtgagatggaaaaagaaatagagctg
cttaaagaaggtgtcagagctgaagaaggaaatacagagttccttcagaaggtagaagaa
tggcaggtaaaagtgaatgaagcagaaaaaaagtacaaagcaatacaagacaaattgata
accgtaagtgaagaagcacaagcccttcatcctcagtgtatttctttgaaggctgaagtg
caggcaaaaagaaaagcagtcaatgaaactgagatagtttataatcgttccaaaacagag
ttaaaacgtctgggaaaagacaatgaacagctatgtaaacgaattgaagaactgaaaagc
tgtgctaatcaggtttcagagcctgaaaaattggaaagacaaaggagaattgcatactta
agggaacagttaaaggcattccatgatgaagaaataatgattgatcagcaggtggatcag
tttcagcaggctatatctaagtgtagggaagaacattctagactcaagagagaaaacagt
gatgtgcaacaagcactggatgccaagcagaaacagctgagagacctgaaggacagtaaa
acaaatactttgaaaagatttggaccccatataccagcatttcttgaagcaattgaaatg
gcccataagcaaggacgctttaaaaagaaacctcttggacctttaggtgctttgattcat
ccaaaagatcctgaactgatcttggctatcgaatcctgtttaaaaggcctacttcaagca
ttttgctgtgataatcatagtgatgaaagaactcttcagtttctgatgtcaaaatatttt
gcccgtggacatagacctcaaataattgtaaataaatttcagaataaaatttatgatact
agtcagagagctgttcgtcatccagaattcccatcagttctgacagctttggaaatagat
gatccagtggttgccaattgtttgattgatatgaggggtatagaaacaatcctgctgatt
aaaaatagccgtaaggctcgtgaagtcatgcagtgcaatcagcccccaaaaaactgcaga
gaagctttcactgctgaaggtgatcaagtgtttgaaagacgctattactcttccagtttt
gttagacccaggttcctaagtcaagatgttgaagcagaaatcagtcacttggatggagaa
attgaaaacaaaagggcacagttgacagcatctcagcaacgtttatattccattgaaaat
gagattaggcaaaatgaagatcatctctatggtcatcgacgacaccaaaaacagctacag
ataaaagtaagaacagcaaatgcagaaatagcagatcttgaaaacatagaagaacaccag
tcagcagacgtccatatattacaagatgaagttgaagaaaataagagtaggatggaatct
gtaaaacaagacatgcagctgcaaagcagaaaaatggaagaactggaaaataatctccaa
gcagctgaaaaacaattagaagaagtgaaagaaaaaattcatcaagtagaagaaattgct
ggcccaattaaggctgaattaaaccaggctgagtcagaagtggaaaacagtaaacggcgt
ttgcagcactatgaagacaaacagagagagcacgtggcttgcataaataagcacaaagat
ttgctagttgccaaaggaaatgaattagaggaaaaaatggcaaaagcaaggcaaatcttc
tcagagcgcatcatggtcaccagaactgttaaaagtctcgatgcagaaatgaatcgcttg
agagagaagataaattcagaaagcagtcaccgtggaaacagagaagaaataatacagcaa
tttcgttatgcaagggaaagatacgaggatgcaagcaataaagtaaagaatttgaagaga
tttattgcagtgctggatgaagtaatgacagagaggctcaaagtgtatcgtcaattctta
aggagcctttctatgcaatgcaaactccattttgagcacttactacgtgttcgaggttgc
tctggaaatataatttttgatcacaagaatgagacactttccataacagttcagcctcga
gaagaagaaaaagcttcccgtagtgatctgagatccctatcaggaggtgaacgttccttc
tccacagtttgtttcattctttctctgtggaacatttctgaatctcctttcagatgcatg
gatgaatttgatgtctacatggacatggttaacagaagaattgccattgacatgattctg
gagagggctgactttcagaggcatcgacagttcattttgttcacccccctgaccatgagc
tctctgcctatgagtccccatattcgaatcctccgcatgccagaccctccaagagaccaa
agaacattgaatttccaaaataggaataacagagatgaagatcaataa
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