KEGG   Corvus cornix (hooded crow): 104685480
Entry
104685480         CDS       T03546                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104685480 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccw03041]
    104685480 (CDC5L)
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104685480 (CDC5L)
Spliceosome [BR:ccw03041]
 Complex B
  Other components
   Prp19 complex
    104685480 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    104685480 (CDC5L)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104685480 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C
Other DBs
NCBI-GeneID: 104685480
NCBI-ProteinID: XP_039425206
LinkDB
Position
3:complement(110476694..110508044)
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYQSLDADFR
RLRQQDLDGELRSEREGRERKKDKQHMKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDTELEEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQKQVVQTPNTVLSTPFRTPSQGS
ESLTPRGGLTPKPALGTTPGRTPLRDKLNINPEEGMADYSDPSYAKQMERESREHLRMGL
MALPAPKNDFEIVLPENAEKELEEHEVDETFVEDAADVEARKQALREAERAKELKRMHKA
VQKNLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHFDLLHHPFGEQFTGKK
GKGPGFGSNNAEHMAYLEQNPYEKFSKEDLKKAQDLLAQEMEVVKQGMGHGELSSEAYNQ
VWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQE
REKELQQRFADFMLDKETFQAKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggcggcgtgtggcggaacactgaggatgaaattctgaaa
gcagctgttatgaaatatggcaaaaaccagtggtctcgtattgcctcattattgcatagg
aaatcagcaaagcagtgcaaagccagatggtacgaatggctggatccgagcatcaaaaag
acagagtggtctcgggaggaggaggagaaactgttgcacctggccaagctgatgccaact
cagtggagaaccattgcccccatcattgggagaactgctgcacagtgcttggaacactat
gaatttctgctggacaaagctgctcagagagacaatgaggaagaaactgctgatgatcct
cggaaactgaaacctggagaaatcgatccaaatccagaaaccaaacctgctaggccagat
cccattgacatggatgaagatgagcttgaaatgctgtctgaggctcgagcacgtctggct
aatacacagggaaagaaggccaagaggaaagccagggagaagcagctggaagaagctcga
cgtcttgctgctctccagaagagacgagaacttcgcgctgctggaattgagatccagaag
aaaagaaaaaaaaagagaggtgtggattacaatgcagaaattccatttgaaaagaagcct
gcccctggtttttatgatacatcggaggaaaattaccagtccctggatgcagatttcagg
agactacgtcagcaagacctggatggagaactacgatctgaaagggaaggaagagagcgc
aaaaaggacaagcaacacatgaaacggaaaaaagagtcagacttgccctcagctattctg
cagaccagtggagtgtcagaatttaccaagaaaaggagtaaactggtgcttccagctcct
cagatatctgatacagaacttgaagaagttgtaaaagtcggccaggcaagtgagattgca
cggcagactgctgaggaatctggaatcacaaactcagcttccagcactcttctctctgag
tataatgtaaccaacaacagcatagcactaaggactcccaaaactccagcagcccaggac
aggatcctgcaggaggcccagaatctgatggctctcacaaatgtggatactcccctgaaa
ggaggtcttaatactcccttgcatgaaagtgacttttcaggggtaacaccacagaaacag
gttgttcagactccaaatactgtgctttccacacctttcagaacaccctctcagggatca
gagagcttaactcctcgaggaggactgacacccaaacctgcacttggcacaactcctggg
agaactccactgcgggataaactgaacatcaacccagaagaaggaatggcagattacagt
gacccatcctatgcaaaacaaatggagagggagtctcgggagcacctgcgcatggggctc
atggccctccctgctccaaagaacgactttgagattgttctgcctgaaaacgcagaaaaa
gaacttgaagaacacgaagtcgatgaaacctttgtagaagatgctgctgatgtagaagcc
cgcaagcaggctctccgagaagcagagcgtgccaaagaactgaagagaatgcacaaagct
gtgcagaagaatctaccacggccctcagaagttaatgaaacaatactgagacccttaaat
gtggaaccacctctaacagacttgcagaaaagtgaagaactcataaagaaagagatgatc
acaatgcttcattttgatcttttacaccatccgtttggagaacagtttactggtaagaaa
gggaaaggcccaggatttggaagcaacaatgcagagcatatggcttacttggaacaaaat
ccttatgagaagttctccaaagaggatctcaagaaggcacaggatctactggcacaagag
atggaggtggtaaagcaaggaatggggcatggggagctgtcaagtgaagcttataaccag
gtgtgggaagaatgttacagccaagtgttgtacctgcctggacagagccgctacacaagg
gctaacttggccagcaaaaaggacaggatagagtcacttgaaaagagacttgagatcaac
agagggcacatgaccactgaagccaagagggctgccaagatggagaagaagctgaagatc
cttcttggtggttaccagtctcgagcaatggggctcatcaagcagctgaatgatttgtgg
gaccagatcgagcaggcccacctggagctgcgcacctttgaggagctgaagaaacacgag
gatgctgcgatccctcggagactggagtgtctgaaggaagatgtgcagcgacagcaggag
agagaaaaggagctccagcagagatttgctgatttcatgttggataaagagacttttcaa
gcaaagtattaa

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