Corvus cornix (hooded crow): 104685489
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Entry
104685489 CDS
T03546
Symbol
SPTLC2
Name
(RefSeq) serine palmitoyltransferase 2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00600
Sphingolipid metabolism
ccw01100
Metabolic pathways
ccw04382
Cornified envelope formation
Module
ccw_M00094
Ceramide biosynthesis
ccw_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104685489 (SPTLC2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104685489 (SPTLC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccw01007
]
104685489 (SPTLC2)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
104685489 (SPTLC2)
Amino acid related enzymes [BR:
ccw01007
]
Aminotransferase (transaminase)
Class II
104685489 (SPTLC2)
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Rep3_C
Motif
Other DBs
NCBI-GeneID:
104685489
NCBI-ProteinID:
XP_039408113
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Position
5:21867161..21947528
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AA seq
549 aa
AA seq
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MERPERPRANGCGGAHGALRNGFVRGPPGTQINHIVHNGGLYKRPFNEAFEETPMLVAVL
TYVGYGVLTLFGYLRDFMRQWKIEKCQNATEREEQKDFVPLYQDFENFYNRNLYMRIRDS
WNRPICSVPGAKVDMMERVSHDYNWTFTYTGRVIKDIINMGSYNYLGFAQKAGACQEAAA
KVLSQYGAGVCSTRQEMGNLDKHEELEKLVARFLGVESAMAYGMGFATNSMNIPALVGKG
CLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVHGQPRTRRPWKKILIL
VEGIYSMEGSIVRLPEVIALKKKYKSYLYLDEAHSIGALGPSGRGVVEYFGLSPEDVDVM
MGTFTKSFGAAGGYIGGKKELIDYLRTYSHSAAYATSMSPPVVEQIITSVKCIMGEDGTT
IGRARVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGV
VVVGFPATPIIESRARFCLSAAHTKEMLDTALKEINEVGDLLQLKYSRRRLVPLLDRPFD
ETTYEETED
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcccgagcggccccgcgccaacggctgcggcggcgcccacggcgcgctccgc
aacggcttcgtccgcggcccgccaggcacccagataaatcatattgtgcacaatggagga
ttatacaaaaggcctttcaatgaagcttttgaagaaacaccaatgctggttgctgtgctg
acctatgtaggctatggtgttctcactctctttggatatctgcgagatttcatgcggcag
tggaagattgagaagtgtcaaaatgcaacagaaagagaagaacagaaggactttgtccca
ttgtaccaggactttgaaaatttctacaacagaaacctctacatgcgcattcgggacagc
tggaaccgtccgatctgcagtgtgccaggggccaaagtggacatgatggagagagtttcc
catgactataactggacattcacgtacacagggagagtgataaaagacattataaatatg
ggttcctacaactaccttggatttgcacagaaggctggggcttgccaagaagcagctgct
aaagttctgtcccagtatggagctggggtgtgcagcactaggcaggagatgggaaacttg
gacaagcatgaggagctggaaaagctagttgccaggttcctaggtgtggaatctgcaatg
gcatatggaatgggatttgcaaccaactctatgaacattcctgctttagttggcaagggc
tgtctgattttgagtgatgaactgaatcatgcatcactagtgcttggagcaagactgtca
ggagcaacgattcgaatctttaagcacaacaatatgcaaagcctggagaagctgctcaaa
gatgctattgtgcatgggcaacctcgtacacggaggccctggaaaaaaattcttatcttg
gtggaaggaatatacagtatggagggatccatagtccgtttgcctgaagtgattgccctt
aagaagaagtacaaatcctatctgtaccttgatgaagctcatagtataggtgccctgggt
cccagtggccggggtgtagtggagtattttggactcagtcctgaagatgtggatgttatg
atgggaacattcaccaaaagctttggagctgcaggaggatacattgggggcaagaaggaa
ctgattgattacctcaggacatactctcacagtgctgcatatgcaacgtcaatgtcacct
cctgttgtggagcaaatcatcacctccgtgaagtgcattatgggtgaagatggtacaact
attgggagagcacgtgtgcagcagctagcagagaacacgagatatttcaggagacgactg
aaagagatgggctttatcatctatggaaatgaagattcccctgttgtgcctctgatgctg
tacatgccagcaaaaattggtgcgtttgggcgtgagatgctgaagcggaacatcggtgtt
gtggttgtgggcttccctgccacccccatcatcgagtccagagccagattctgtttgtct
gcagctcataccaaagagatgcttgatacagctttaaaagaaatcaatgaagttggggac
cttttgcaactgaaatattcccgtcgccgtttggtacctctcttggaccggccgtttgac
gagacaacatacgaagaaacagaagactga
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