Corvus cornix (hooded crow): 104685510
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Entry
104685510 CDS
T03546
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104685510 (TAF1B)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104685510 (TAF1B)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Motif
Other DBs
NCBI-GeneID:
104685510
NCBI-ProteinID:
XP_039424022
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All DBs
Position
3:99967834..100020854
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AA seq
580 aa
AA seq
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MDEEDTRDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNTDFITNSRIQTISK
SLRKQEKNDGGCEWYICEGFQLVLKKQAEALEALGVCPQMKDEILCNFWRCYLQKSKQAY
CKRPAGETVKALSVCESSTDVDSDPERPSLLHLLSLSESEGDLQTDCSFASSVTKVSEST
SVYSGSVDGSLYLMKNQKEKLRMTMPMTLSFCYMALLWLREPITLSELLRFVVEGHIPYL
NVFQHFPEKMNLCGLDLRIFCVESWPVYEEVFNKMHELAAFLDLPRFPDITDSCFLHPDM
LCMKYLMEANLPDELHNWTCRVVKKIGIGEVDFLTLMPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSEFAEERNKNNTEGGPYFEFKKWYEVVKQSLDVEQKKLDEERAKYL
WRCEKPLFYSVKNKPKVLKRRQMVVNLQNQFGKLSGSVRRAEKPNPSSFQLNWSEENTDG
SCFHGHSLKGVLQEKCGLLTAMNPDYWLCTVKLCNEKLCGHLAHYREVEFPQSYHFVLGL
FAFLLRIQPSYIHDEVCMIEHKLFNKKLYKKLKYNTVLRK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacacgagagattttaatgagcgctgtgcccagtgttcagaagtgaac
tggggtctcactgatggaggcagattttattgtagatcttgccacaacgttactgagaga
actagagaagttgtaaacactgattttattactaattcaagaatccaaacaatctccaaa
agtttgagaaagcaggaaaaaaatgatggaggctgtgagtggtatatttgtgaaggcttt
cagctggtactcaagaaacaagcagaagctttagaagcattaggagtatgtccacaaatg
aaggatgaaattctgtgcaatttttggaggtgttaccttcagaagagcaagcaggcatat
tgcaagagaccagctggggaaactgtgaaagcattgtcagtatgtgagagcagtactgat
gtggacagtgatccagagagacccagccttctgcacttgctgtctctgtctgaaagtgag
ggggatctgcagaccgactgcagctttgcctcatcagtgaccaaggtctcagagagcacc
tctgtgtactctggatcagtagatggcagcttgtatttaatgaagaaccaaaaggagaaa
ctgaggatgacgatgccaatgaccctttcattttgttacatggcattactctggttgaga
gaaccaattacattgtctgagctcttaaggtttgttgttgaaggacacattccatatttg
aatgtttttcagcattttccggagaagatgaacttatgtggactagatcttaggatcttt
tgtgtagagtcgtggcctgtatatgaagaagtattcaacaaaatgcatgagcttgcagcg
tttttagacctgcctcgttttccagatataacagacagctgctttcttcatccagacatg
ctgtgcatgaagtatttgatggaagccaatttacctgatgaattgcataattggacttgc
cgagtggtgaaaaagattggtattggagaagtggatttcctgactcttatgcctggaaat
aagtcaacaagaaaagtgaaatatgatgttcttgctgcagcagttattgtagttgtgctc
aaattactgtttttattagatgatcactatgaatggttactttcagagtttgctgaagaa
agaaataaaaataacacagaaggtggtccatattttgagttcaagaagtggtatgaggtg
gtaaaacagtccttggatgtggagcaaaagaaattggatgaagaaagagccaagtatctg
tggagatgtgaaaagccattgttttactcagtcaagaataaacctaaagtgctaaagaga
agacaaatggttgtgaacttacaaaatcagtttggcaagctgtctggttcagtgcgacgt
gctgaaaagccaaatccttcaagttttcagttaaattggtctgaagaaaacacagatggg
agttgttttcacgggcatagcctgaagggagttttgcaagaaaaatgtggtttactgaca
gccatgaaccctgactattggctgtgtacagttaaactatgtaatgagaaattgtgtggt
catctggctcattacagagaagtggagtttccccagagttaccattttgtactagggtta
ttcgcctttcttctgaggattcagccctcttatatccatgatgaggtgtgtatgatagag
cacaaactttttaataaaaaactctataaaaaactaaaatacaacacagtcctaaggaag
taa
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