Corvus cornix (hooded crow): 104685574
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Entry
104685574 CDS
T03546
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
ccw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104685574 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
104685574 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104685574 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104685574 (GTF2H1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104685574 (GTF2H1)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104685574 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
104685574
NCBI-ProteinID:
XP_010391840
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All DBs
Position
5:complement(49223151..49246971)
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AA seq
562 aa
AA seq
DB search
MAGMVKEQSLIVATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHM
YADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRK
ANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGIS
AAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQS
HYFHRDRLNTGSKDLFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVA
STSNASKSARESSNAAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQ
PPLKKVKLQEAIEYEDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHS
IRQEMEAYVPKLTQVLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYV
AVGELLRHFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIE
EMLQTAYNKFHTWQSRRMLKKT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatggtgaaggagcaaagcctcattgtagccacaatggcaacgtcatctgaa
gaagtgttgctgatagtgaagaaggtgcgtcagaagaagcaggatggagctctgtacctg
atggctgaacgcattgcctgggcacccgagggcaaggaccgcttcactgtcagccacatg
tatgcggacatcaaatgccagaaaatcagtccagaaggtaaagctaaaattcagctgcag
ctggtattgcatgcaggggacacaaccaacttccacttctccaatgaaagcacagcagtc
aaggagcgagatgcggtcaaggatcttcttcaacaactgttgcccaagttcaaaaggaaa
gctaataaagaacttgaggagaagaacagaatgctgcaagaagatcctgttttgtttcag
ctctataaagaccttgttgtgagccaagtaatcagtgctgaagaattctgggccaaccgt
ttaagcctgaatgcaggggataattctgcagcacctagtaagcaggatgtgggcatctct
gcagcattcctggctgatgtacggcctcagacagacggctgcaacgggctgaggtacaac
ttgacttcggatattattgaatccatatttcggacataccctgcagtaaaaatgaaatat
gcagagaatgttccacataacatgaccgagagggaattctggacacgattttttcagtct
cattattttcatcgggataggctcaacacaggctcaaaagacctctttgcagaatgtgcc
aaactggatgagaaagggttaaaagcaatggtgtctcaaggagtgaaaaaccccctgata
gatttaacagctttggaagataaaacattagatgaaggctatggcgttgcttctgtggcc
tctacatcaaatgcctcaaagtctgctagagaaagtagcaatgctgccatcataaaacgc
tttaatcatcacagtgccatggtccttgcagctggcctcaggaaacaagaagcacaaaat
gaccattacagtgagaccagcagtacggatggaaactccagggattcagatttctttcag
ccaccactgaaaaaggtaaaactgcaggaggccattgaatatgaagatttatcaaagaat
aatagcgttaaaactattgcactaaacttaaagaagtctgataggtattaccatggtcct
actccaattcaatcacagcaatatgcaaccagtcaggatataattaattcatttcatagt
attagacaagaaatggaagcatatgtacccaaactaactcaggttctttcaagtggtgat
gctgccagcactattgcagtcctgtcacctggaggagcacttatgcagggtggaacacag
caagccataaaccagatggtgccaaatgacattcagtctgaactaaaacacttgtacgtg
gcagtaggggaactgctacgacacttctggtcctgcttccctgttaacacgccattccta
gaagaaaaggttgtgaaaatgaggagcaacttggaaagatttcaggttacaaagctctgc
ccattccaagaaaagattcgaagacaatatttaagcacaaatttgataagtcatatagaa
gagatgctgcagacggcctacaataagttccacacgtggcagtcccggcgcatgctgaag
aagacgtga
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