Corvus cornix (hooded crow): 104685806
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Entry
104685806 CDS
T03546
Symbol
TDP2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104685806 (TDP2)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104685806 (TDP2)
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GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
Exo_endo_phos2
UBA_8
Motif
Other DBs
NCBI-GeneID:
104685806
NCBI-ProteinID:
XP_010392133
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Position
2:93599919..93606076
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AA seq
370 aa
AA seq
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MEEGAEAAPSPPPAGQKREEEEEEEAALHVAKRRKVLCSEFAAITSSDAAVARRFLAGSD
WHMERALNAYFDPPRGTEAAAGGAAPGSADTGSCIDLTADAATSNAGVGSADSQQKEDDS
SFSLITWNIDGLDLGNLKDRARGVCTYLALYSPDVVFLQEVIPPHLSLLQMKAGNYTIIP
GNIDEYFTVIMLKKSRVKLLKHEVIPFPTTAMKRNLLVVHVSVSGVELCLMTSHLESTKN
HSKERIKQLQIVLNEMQKESESTTVIFGGDTNLRDSEVTKLGNLPDNIKDVWEFLDKPQH
CRYTWDTQSNTNLNAAYKCKMRFDRVYFRPAVEGGHFIPRSMDLIGLEKLDCGRFPSDHW
GILCNFDVIL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggagctgaggcggcgccgagcccgccgccggcggggcagaagcgggaggag
gaggaggaggaggaggcggcgctacatgtcgccaagcggaggaaggtgctgtgctccgag
ttcgccgccatcaccagcagcgacgcggccgtggcgcgccgcttcttggccggcagcgac
tggcacatggagagagcgctgaacgcctatttcgacccgccgcgggggacggaggcggcg
gcgggcggggcggccccgggcagcgcggacaccggcagctgcattgacctcacagcagat
gcagctacaagtaatgctggtgttggtagtgcagactcgcagcaaaaagaggacgacagc
agcttctcactgatcacctggaacattgatgggctggatctaggaaacctgaaagatcga
gctagaggggtctgtacgtacctggcattatacagtccggatgttgtgtttttacaggag
gtcatcccaccacacctctctcttctccagatgaaagcaggcaattacactattattccg
ggtaacatagatgagtatttcactgtcataatgttaaagaaatcaagagtgaagctgctg
aagcatgaggtaataccttttcccacaactgccatgaagaggaaccttttggttgtgcat
gtgagcgtatctggtgttgaactttgccttatgacctctcatctggagagcaccaaaaat
cactctaaggagcgtataaagcagctgcaaatagtgttaaatgaaatgcagaaggagtct
gagtccaccactgttatatttggaggggatacaaacctcagagacagcgaggttactaaa
cttggtaacttacctgacaacattaaggatgtgtgggagtttttggataaacctcagcac
tgccgctacacttgggacacgcagtccaacaccaacctgaatgcagcctacaaatgcaag
atgaggtttgaccgtgtttacttccggcctgcagtggaaggggggcattttattccacga
agcatggacttaataggtttggaaaaactagactgtggcaggtttcctagtgatcactgg
ggtattctgtgtaattttgatgttatattataa
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integrated database retrieval system