Corvus cornix (hooded crow): 104686009
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Entry
104686009 CDS
T03546
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104686009 (ZBED1)
04121 Ubiquitin system [BR:
ccw04121
]
104686009 (ZBED1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
104686009 (ZBED1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
104686009 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
104686009
NCBI-ProteinID:
XP_039423470
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All DBs
Position
1:82971456..83027371
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSPANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCNLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRAEEKFFTVSEEPPMKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNINNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccgaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcagaaggatgcatatta
cagtggaagaagatctactgccgtatttgcatggcacagattgcctattcaggaaacacg
tccaacctttcctaccaccttgagaaaaatcaccccgatgaattctgtgagtttgtgaaa
agtaacactgagcaaatgagggaagcctttgccacagcattttcaaaaatcaagccggag
tcatcacagcaggttgttcaagatagcctcatcatgaagacctaccagaactacgaaaac
aaaaaacatcaggaactgacatctgcagtcatcagcttaatttgcgagggcatgtatcca
gcctccatcgttgatgaacctaccttcaaggccctcttgagaacagcagaccccaggtat
gaacttccgagccggaagtacttctgtacaaaagcgattcctgaaaagtacagtgctatt
agagaaattgtgctgaaagagctcactgaggttctgtggtgtggcatatccacggacatg
tggaggagcgaaaaccagaacaggtcatatgtaaccgtggcagttcactttctcagcagc
agtcctgccaactgcctggctgtgaactcacggtgtttgaaaacattcgaagtaccagag
gataacactgcagagaccattacacgagttctttatgaaacattcattgagtgggggatc
aatacaaaagtctttggtgctacaacagattacagtaaagacattgtgaaagcttgctct
ctcctagatattcccgtacagatgccttgtttggggcacacttttaacgcaggaatacaa
caagcttttcagctccccaaactctgcaaccttcttgccaggtgccgaaagctagtggag
tattttcagcagtctacggtcgcaatgtacatgctgagcgaaaagcagaagcagcagaat
attctccactgcatgctggtaagtgaccgtgtttcctggtggggaagcacactcgctatg
ctgcagcgcctcaaggagcagcagtttgtcattgcggctgttctcgtggaggacagcaac
aaccaccacctcatgctggaatccagtgagtggaatacaatcgaagggctggtggagctg
ctccagcctttcaagcaggttgcagagatgatgtctgcttcaaagtacccgacgataagt
atggtgaagccacttctccacatgcttctgaatactactctgaacatcaaagagaacgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagttgtcaaccacctaccag
cacacacctgagatagacatgtttctcaatgttgcaactttcttggatccccgctacaag
aaactgccttttctttcagcctttgaaaggcagcaggtggaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtaaaagaaaatagctttagagctgaagagaaattcttc
actgtttcagaagagccccctatgaaaaaaatcatcatctcctctactcctcctcctacc
agtgtcatcaacaacatgcttgcagagatcttttgccagacgggaggcgtggaagaccag
gaggaatggcatgctcaaatcgttgaggagttgagcaacttcaagtcacaaaaggtcctc
ggtttgaatgaggacccattgaagtggtggtctgacagactagcgctgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattctggccacaagggtcttccctgaacgcctt
tttggttcttctgctaatgttgtgagtgcaaagagaaaccggttagccccggctcatgtg
gatgagcagatctttttgtatgaaaacagtcggaatgggtctgaggcagaaccggaggac
gaagacgaaggagagtggggtttggaacaggaacagatttttaatttaaatgactcggta
aacataaacaataatttctttaatattcgagacagtgggtttgtttaa
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