Corvus cornix (hooded crow): 104686021
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Entry
104686021 CDS
T03546
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104686021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104686021
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104686021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
104686021
NCBI-ProteinID:
XP_010392474
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All DBs
Position
1:complement(84344892..84406636)
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AA seq
1193 aa
AA seq
DB search
MIAEPNAASNLPSQKENAVHDETVPESAAQNGNCVRNGNLKTPREKRKVREQCENIRRNS
TGNRRVSQLQNGQVVEAVTLFEVVSMGKQAMQSVVVDWIEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLHKKDVMRKMTETFDKETGLQYKKFMAYPWILTVTWPVDMDNEDYP
LIRTGPYWKKFKANFCEFIAVLVQQCQCSILYDNYLMDTIISLLTGLADSMVRAFRHTST
LAAMKLLTAVVGIHLNLDVNKHNAQRLYEVEKRRISGKRTSYRLDQLERKRKEYEHKLLE
IQNMMNAIFKGTFLNRYRDVIPEIRATCIEEISSWIKTYPDAFLNDSYLKYVGWMLYDKQ
AEVRLKCLLGLQGIYSRKELVSRMDLFTNRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDVLSAEDCEMLHQFVYTTHRPLAVAAGEFLYKRLLSHEGDKEVQPKGGGKFGASTDQL
KRLIHFFLESELHKHVAYLIDSLWDWAGKFLKDWECMTTLLLKNAEEDGEALSDAQESAL
IEIILATVREAAEGHPPVGRGAAKKILSVKEKKIQLEDCTKITEHFIMVLPQLLAKYSTD
AQKVANLLQIPQYYDLDVYSTGHLEKHLDALLREIKDIVAKHSDMSVLEASSRTYYILCS
EEIAIYSQVDCARTQMIDELMDQLNQLLDCFWQKEGGFCTDAGEISRMHSTLRRIAAFHN
AHDLTKWNLYDKTLRFLVFEMEHGSLPVLIILPALQCTYFSLLWQLAAVSENSPKETLFP
LRRELRRFSQICTCFLQHKEKDVREKAFMILCDWLLILSHLDSNNNQEAVGLLGYLPNTP
LQEKLLSFIQEHVFMDEEDEKKDLTEEEKDESCKLDDLHKKRSLLAAYCKLIVYNVVEMT
AAAEIYKHYVKTYSDFGDIIKETLSKTRHNNKIQSAKTLILCLQQLFQTHAENQDSSSGV
DFSSASFTNIKELARRFSLTFGWDQVKSRESIAMIHKEGIEFAFQGATGVDGKCLPPNLS
FLVIISEFSNKLLKPDKRLVYSYLQRYITEPLPCRGDEWQPLVWYRNSLLANEDEESSVF
GSLGEWPPVSSSKTSSFKRKLSNGSLPETSQTEAASKALEQQGASQLPSSAGKSRKRLKS
REMRLQEHLPFLCPGGLRRRYCKDEIKTEDVSEEGPAEDTIEDVDIVGTDQDI
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagcccaacgcagccagtaaccttcccagccaaaaagagaatgctgtccat
gatgagactgtgccagagtctgctgcgcagaatggcaactgtgtgagaaatggtaacctg
aaaacaccaagagagaagcggaaggtccgagaacagtgtgaaaacataaggaggaattct
actggtaacagaagagtgagccagctgcagaatggccaagtggttgaggcagttaccttg
tttgaagtggttagcatggggaagcaggccatgcagtctgtagtagttgactggattgaa
gcttacaaacaagacaggaatgtggcacttctggatctcatcaacttcttcattcagtgc
tcaggctgtcaaggcatggtaactgcagagatgtttcaaagtttgcacaagaaggatgtc
atgcgaaaaatgacagagacctttgataaggaaactgggttgcagtacaagaaattcatg
gcctatccttggatcctgacagttacttggccggtggacatggacaatgaagactaccca
ctcatcagaacaggaccctactggaagaagttcaaggccaatttctgtgaattcattgca
gtgcttgtccagcagtgccagtgcagcatcctgtatgataactacttgatggacaccatc
atctcgctgcttacaggcttagcagattccatggtcagagcattcaggcacacaagcact
ttggcagcaatgaaacttctgacagcagttgtaggcatccatctgaaccttgatgtcaac
aaacacaatgctcaaagattgtatgaggtggagaagcggaggataagcggcaagaggacc
agttacagacttgatcagctagagagaaaaaggaaagagtatgagcataagcttctagag
atacagaacatgatgaatgctattttcaaagggacatttctaaaccgttaccgtgatgtt
atccctgaaatcagagcaacttgcattgaagaaattagcagctggattaaaacataccca
gatgcttttttgaatgacagctacttaaaatatgttgggtggatgctgtacgataagcaa
gctgaagtacggttgaagtgtcttctgggactgcagggaatttatagcagaaaagaactt
gtttccaggatggatctctttactaacagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgtattatcagctgaggactgtgaaatgttgcaccagtttgtttataccaca
caccgtccgcttgcagtagcagctggggaattcctttataaaaggctgcttagtcatgag
ggagataaagaagttcagcccaaaggaggaggaaagtttggggcgagtactgaccaattg
aaaagattaatacactttttcctggagagtgagctacacaaacatgttgcatacctaata
gacagcttgtgggattgggcaggcaaattcctgaaagattgggagtgcatgactactctt
ctactaaaaaatgctgaagaagatggagaagcactgagcgatgcccaggaaagtgctctc
atcgaaatcatcctcgcaacagtcagagaagcagctgaaggtcatcctccagtgggcaga
ggtgcagccaaaaaaattttgtcagtgaaagagaagaaaatacaattggaagattgtacc
aaaattactgaacactttattatggtgcttcctcagctcttggcaaagtattcaacagat
gcacaaaaagtggcaaatcttctgcagattcctcagtattatgatttagatgtttacagt
acgggacatctagagaagcatttggatgctttgctgagagagattaaagacattgtggcc
aaacactccgacatgtctgtcctcgaggcttcctccaggacttattatatcctctgcagt
gaagaaattgccatctatagccaggtggattgtgctcgaactcaaatgatagatgagtta
atggatcagcttaaccagctactagattgcttctggcaaaaggaaggaggattttgtacg
gatgcaggagaaatatcccggatgcattctactttgagaagaatagcagcttttcataat
gcccatgatctcaccaagtggaatctgtatgacaagactttaaggttcctggtgtttgaa
atggagcatggcagtttgcctgttctgattatcctgccagctctccagtgcacgtatttt
tctctcctgtggcaactagctgccgtttcggaaaattctcccaaggagactctttttcca
ctaagaagggagctgagacgtttcagtcagatttgtacatgcttcctccagcataaggaa
aaagatgtaagagaaaaggccttcatgatactctgtgactggttgctgattttgagtcac
ctggattcaaataataatcaagaagcagttggacttctaggttatcttcctaacacacca
cttcaggaaaaactgctttcatttatccaggaacatgttttcatggatgaagaagatgaa
aaaaaagatctgacagaagaggaaaaggatgaaagttgcaaacttgatgacttgcacaaa
aagcggagtcttcttgcagcatattgcaagttaatagtgtataatgtggtagagatgact
gcagcagctgagatctataagcattatgtgaagacctacagtgattttggagacataatt
aaagaaacattaagcaagacgaggcacaataacaaaattcagagtgccaagacactgatt
ctctgtctgcagcagctgtttcagacacatgcagaaaaccaagacagcagtagtggtgtg
gacttctcctctgcttcctttacaaacatcaaagaacttgctcgtcgcttttcactaaca
tttggttgggaccaagtgaaatctagagaatctatagccatgatacacaaggaagggatt
gaatttgcttttcaaggagctactggagtagatggaaaatgcttgcctcctaacttgagc
tttctggtaatcatcagtgaattttccaacaagctgctaaagccagacaaaagactagtg
tacagttacttacagaggtacataacagagccactgccctgcagaggagacgaatggcag
cccttggtctggtacagaaactctttattggcaaatgaagatgaggagagctctgtcttc
ggcagtttgggagagtggccccccgtgagctcatctaagacatcttcttttaaaaggaaa
ttgtctaatgggtctttgcctgaaaccagccagactgaagcagcaagcaaagccctggaa
cagcagggtgcttcccagcttccctcctcagcagggaaaagcagaaagaggctgaaatct
cgagagatgcgcttgcaggagcatttgccattcctttgtccaggagggctgcgcagaaga
tactgcaaagatgagattaagacagaagatgtctccgaggagggtccagcagaagacaca
attgaagatgttgacattgttggtacagaccaggacatttaa
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