Corvus cornix (hooded crow): 104686074
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Entry
104686074 CDS
T03546
Symbol
TRIP11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104686074 (TRIP11)
Membrane trafficking [BR:
ccw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
104686074 (TRIP11)
Retrieval pathways
104686074 (TRIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
Motif
Other DBs
NCBI-GeneID:
104686074
NCBI-ProteinID:
XP_010392567
LinkDB
All DBs
Position
5:15960878..15990239
Genome browser
AA seq
1951 aa
AA seq
DB search
MASWLGGLGSGLGQSLGQVGDSLSSLTGQISSFTKDILLEGAEEVGDAATELHVSNSRLR
EIESINAAQKFENDRLKKVCTDLEEKHEAAELQIKQLSIEYRNQLQQKEVEISHLKARQN
ALQEQLQKVQTAAQTAQLGAGVLPAATASASYVPVVRHSSGFEGDDMDFGDIIWSQQEIN
RLSNEVSRLESEVDHWKQIAVSSRVQGTNDAEQSEICKLQNVVKELKQNLSQEIDEHQHE
LSVLQDAHRQKLVEIGRRHREELREYEERIEELENQLQQDGVSTDAVDDSKITEQKKKPQ
SLDGGKVEELQIVKNLEDEIRKLNHKLSSAKAENRNLLKEQEFAKLEKIQIAQDYEKLKS
DFSVLQRSVAEQDALLKEQKQLQSKTSQPQDVVRLQQALLEAENEIARLSSLNQGLEKEL
TSAQHKHENILSSNTEDQNSEINQLRQDLERKEHELDESVAERETLIAELEELDKQNQEA
TQHMITLKEQLSKQRTETDSIIKQLKLDIDCERNKVSELETEKMKTIKELDSQKEKLNQC
SYALNDLHIIKQQLQDNIKDLQEQLRKAQDCNLHSKKEIGELQQKLKEREEELCVSLSQL
TEKSNEESNNTCQDLILKEREVEITKLQNDVSENKQLNEDLQKSLSNLRTENAELIVAIE
DLKQELSDAISEKKKVYLEKDTVVEALKMEKRQLESELNETEKRLLEQAHNYKQTIQELS
NARSMDTTALQLEHERLVKLHQEKDFKIAELKRSIEQMEIDHQETKEMLTTSLGGQKQLT
DLIKEKELFIEKYKNQALQVKQELEEYMKVSKKQDVLKQNLEEKDRSLAVMKEENNHLKE
EIERLKDQQSRSTPVVEPKTLDIIIELESEVTQLKVIKTNLEEEIKVHKKTIEDQNQTTV
KLQQSLQEQRKEIDESKFQCEQMNVTHERLFLEKDEEIKNLQKTIEQIKTQLHKERQIIQ
TDSSDLFQETKVQTLNGENGNEKHDLSKAEIERLVKGIKEREMEIKLLNEKNVSLSQQID
QLSKDEVGKLTRIIQEKDLEIQALNARVSSASYRQDVLTLQQQLQAYVMEREQVLAVLSE
KTRENSQLKTEYRNIMDMVAAKEAALVRLQEENRKLSNRSENSSQDMSRETIQNLSRIIR
EKDIEIDALSQKCQTLLTVLQTSSTGAGNGAGGVNSNQFEELLQERDKLKQQVKKMEEWK
QQVITTVQNMQHESAHLQEELHKLQAQISVESDSTSRLQVDYNGLIQSYEQNEKKLKSFS
QELAQVQHSIGQLCNTKDLLLSKLDLVTPSVAAAPTVSQLSDVQCSPPEALSEEYKLLQI
ELEQLKKKLQEKDSTIRTLQENNQRLSDSVAAASEIERKSQEETESEMRQIKEKHDVLQK
SLREKDILIKSKSDQLLSVSENLSNKENENELLKQAVTNLKERNLILEMDIRKLKEENEK
IVTRCREKETEFRALQETNMQFSMMLKEKEFESHSMKEKALAFEKLLKDKEQGKTGELNQ
LLNEVKSMQEKAVTFQQERDQVMVALKQKQMESSALQSEVQHLHEKEQRLNQELERLRNH
LLEMEDSYTREALAAEDREVKLRKKVLILEEKLASSSTAVENASHQASLQVESLQEQLNL
VTKQRDETVLQLTISQDQVKQYALSLANLQMVLEQFQQEEKAMYSAELERHQKQSAEWKK
KAENLEEKVVSLQESLEEANAALDAASRLTEQLDIKEEQIEELKKEGEIRREMLEDVQNK
LMNLMNSTEGKVDKLLMRNLFIGHFHTPKNRRLEVLRLMGSILGLKKDELDQLLSEEQRG
VTRWVTGWLGGGAGSKSVPSTPLRPTHQNIFNSSFSELFVKFLETESRPSLPPPKLSVHG
MKPLGAAGTGKTNSTPSNSQMQDSAVSGMGRRPDANPFIAPRSAAVPLITPATSSGHLLM
KPISDALPTFTPLPVSPDASAGAVLKDLLKQ
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtggctgggcgggctgggctcggggctgggccagtccctggggcaagtgggc
gacagcctgtcctcgctcaccgggcagatctccagcttcaccaaggacatccttctggaa
ggagcggaggaagtgggcgatgcagcaacagaactccatgtgtccaattctagactcaga
gaaatagaaagtattaatgcagcacagaagtttgaaaatgatagactgaaaaaagtctgt
actgacttagaagaaaagcatgaagcagcagagctgcaaataaagcagttgtctattgag
taccgcaatcagcttcaacagaaagaggtggaaatcagccatctaaaagccagacagaat
gcactacaggaacaactgcagaaagtacagacagctgctcagactgcccagttgggagct
ggtgttttgccagcagccactgcatcagcctcctatgttccagtggtcagacattcctca
ggttttgaaggagatgacatggattttggagatataatctggtcacaacaggaaataaac
agattgtccaatgaagtttccaggctcgaatcggaggttgaccactggaagcagattgca
gtgtcttccagagtgcaaggcacaaatgatgctgaacaaagtgaaatatgcaaactacaa
aatgttgttaaggagctcaagcagaatttaagtcaagaaatagatgaacatcagcatgag
ctgtcagtgttgcaggatgcacacagacagaagttggtagagataggtcgccgacaccga
gaagaactgcgtgaatatgaagagcgaattgaagaactcgagaatcagttacagcaagat
ggtgtgagcacagatgccgtggatgactctaaaattactgaacagaaaaaaaaacctcaa
agtctagatggaggaaaagtagaagagttgcagattgtaaagaacctagaggatgaaata
agaaaattaaatcacaaattgtcttctgccaaagcagaaaacagaaatcttctgaaagag
caagaatttgcaaagctagaaaaaattcaaatagcacaagattatgaaaagcttaaatct
gactttagtgtgcttcaaagatctgtggcagagcaagatgctctcctgaaagaacagaag
cagctccaatcaaagacatcacaaccacaagatgttgtcagactacagcaagcattgtta
gaagcagaaaatgaaatagcaagactttccagtttaaatcagggacttgagaaggaactg
acaagtgcacaacataaacatgagaatattctttcttcgaatacagaggatcagaattca
gaaataaatcaattaagacaagatttggaaaggaaagaacatgaattagatgaaagtgtt
gctgaaagggaaacattaatagcagagttggaagaactagacaagcagaatcaagaagct
actcagcatatgattacactgaaagagcagctgtcaaagcaacgcacagaaactgatagt
atcatcaaacagctgaaacttgacatagattgtgaaagaaacaaagtatcagaattagaa
actgagaagatgaaaactattaaagagttggatagtcagaaagaaaaactaaaccaatgt
tcatatgcacttaatgatttgcatataattaagcagcagctacaagataatattaaagat
cttcaggaacaattaaggaaagcccaggactgtaatttgcatagtaaaaaagaaattgga
gaattgcagcagaaactaaaagaaagagaggaggaactttgtgtatccttgagccagtta
acagaaaaaagtaatgaggaatctaacaacacttgtcaagatctgattctgaaagaaaga
gaagttgaaattacaaaactacagaatgatgtttcagaaaataaacaactcaatgaagat
ttacagaaatctctgtctaatcttagaacagaaaatgcagagctgatagtagccattgaa
gacctaaaacaggagttaagtgatgccatttcagagaaaaagaaagtttatttggaaaaa
gacactgttgtggaggctttgaaaatggaaaaaagacagttagagagtgaattaaatgag
acagagaagaggcttttggaacaagcacataattataagcaaactatccaggagttatca
aatgcccgtagtatggataccactgcactgcagcttgaacatgagcgcctggttaagctc
catcaagagaaagactttaagattgctgagcttaaaaggagcattgagcagatggaaatt
gaccatcaagaaacaaaagagatgttaactactagcttaggaggacaaaagcagttgaca
gatctcataaaagagaaagagttattcattgaaaaatacaaaaatcaagccttacaggtg
aagcaggaacttgaggaatatatgaaagtttcaaaaaagcaggatgtcttaaaacagaac
ttggaggagaaagacagaagtcttgcagtcatgaaggaagaaaataatcatttgaaagaa
gaaattgaacgccttaaagatcagcaaagtagatctacacctgtggttgagcctaaaact
ttggatattattattgaacttgaaagtgaggtaacacagttaaaagtgataaagactaat
cttgaagaagaaataaaagttcacaaaaaaacaatagaagatcagaatcaaacaacagtg
aaacttcagcagtcactgcaggagcagcgaaaggaaatagatgagtccaaatttcagtgt
gagcaaatgaatgtcacacatgaaagactctttttagagaaagatgaggaaatcaaaaac
ttgcagaaaacaatagaacaaattaaaactcagttgcacaaagagagacagattattcag
actgattcttctgatctttttcaggaaaccaaagttcaaacccttaatggagaaaatgga
aatgaaaaacatgacttatctaaagctgaaattgaaagactagtgaaaggtatcaaggaa
agggagatggagattaagctcttaaatgaaaagaatgtttctctaagtcagcaaattgat
cagttgtctaaggatgaagttggtaaacttactcggatcattcaagagaaggatttagaa
atacaagctcttaatgccagagtttcctcagcttcctacaggcaggatgttctgaccctt
cagcagcaactgcaagcttatgttatggaaagagaacaagtactagcagttctaagtgaa
aagacaagggaaaacagtcagttaaaaacagagtatcgtaatatcatggacatggtcgct
gctaaagaagcagctttggtgaggttgcaagaggagaaccgaaaattatctaatagatcc
gaaaacagcagtcaagacatgtctagagaaactattcagaatttgtcccgtatcattcga
gaaaaagatattgaaatagatgccctaagtcaaaaatgccaaaccttattgactgtcttg
cagacatccagtacaggtgctggtaatggggcaggaggtgtgaatagtaaccagtttgag
gaacttctgcaagaacgtgataaactaaaacagcaagtaaagaaaatggaagagtggaaa
caacaggtaataaccacggttcagaacatgcagcatgagtcggctcacctccaagaagag
ttacacaagctgcaagcacaaatttcagttgaaagcgatagtacttcaagactgcaggta
gattataatggcttgattcagagttatgaacagaatgagaaaaagctgaaaagttttagt
caggaattagcacaggttcaacacagcataggacagctttgtaacactaaggatcttctc
ctgagtaaactggatttggtaacaccgtctgtggcagcagctcccactgtttcacagctt
tcagatgttcaatgcagtcctcctgaagcactcagtgaggagtataaactccttcaaatt
gagttggaacaactgaaaaaaaagttacaagaaaaagattcaactattaggactcttcag
gaaaacaatcagcgattatctgattctgttgctgcagcatcagagattgaaagaaagagt
caagaagagaccgaatcagagatgaggcagatcaaagaaaaacatgatgtgttacagaaa
tcacttagggaaaaagatatattaattaaatctaaaagtgatcagttactttctgtgagt
gaaaatcttagtaacaaagaaaatgaaaatgagcttttgaagcaagctgtaactaatcta
aaagaaagaaatttgattttagaaatggatattcgaaaactgaaagaagaaaatgaaaaa
atagttacaaggtgcagggaaaaagaaacagaattccgtgcacttcaggagactaatatg
caattttcaatgatgctgaaagagaaagagtttgagtctcactcaatgaaggaaaaagct
cttgcttttgagaagctgttgaaagacaaagaacagggcaagacaggagaattgaatcag
ctgttaaatgaagttaaatcaatgcaggagaaggctgttacttttcagcaagagagagac
caagtcatggtagcactcaaacaaaagcaaatggagagcagtgccctgcagagtgaggta
cagcatttgcatgagaaggagcagcgcctaaatcaggaactggagaggttgcggaatcac
cttttagaaatggaagactcctacaccagagaagctttagctgcagaagacagagaggtc
aagctaagaaaaaaggttttgattttggaagaaaaacttgcatcctcatctactgcagta
gagaatgccagtcatcaggctagtctgcaagttgaatctttgcaagaacagttaaacctg
gttaccaagcagagagatgaaactgttctgcagctgaccatctcccaggaccaagtgaag
cagtatgcactgtctctggccaacctgcagatggtactagagcagttccaacaggaagaa
aaagctatgtattcagcagaactggaaagacaccagaaacagagtgcagaatggaagaag
aaagcagaaaacctagaagaaaaagttgtgtcactgcaggagagtttagaagaggcaaat
gctgccctggatgcagcatccaggcttactgagcagcttgacatcaaagaggagcagatt
gaagaacttaagaaagaaggtgagatcagaagagaaatgttagaagatgtacaaaataaa
ctaatgaaccttatgaacagcacggaaggaaaagtggacaaactgttgatgagaaatctc
tttattggacattttcatactccaaaaaatagacgtcttgaagtgttaaggttaatggga
agtatcttgggactaaaaaaggatgaacttgatcagttactatctgaagagcaaagagga
gttacaagatgggtgactggctggcttggtggaggagcagggtcaaagagtgttcctagt
acacctttgagaccaactcatcagaacatttttaatagttctttttcagaactgtttgtg
aaattccttgaaacggaatctcgcccaagccttcccccacccaagctctctgttcatggc
atgaaacctttgggagcagcaggaactggtaaaactaacagtactccatccaatagtcaa
atgcaagattctgcagtctcgggaatgggtagaagaccagatgcaaatccatttatagca
cctcgatctgcagcagtgcctctcataacaccagctactagttctggacatctgcttatg
aaacctatttctgatgcattgcctacttttacaccactgccagtgtcccctgatgccagt
gctggtgctgtattaaaagacctcctaaaacaatag
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integrated database retrieval system
