KEGG   Corvus cornix (hooded crow): 104686109
Entry
104686109         CDS       T03546                                 
Symbol
CUL4A
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03420  Nucleotide excision repair
ccw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104686109 (CUL4A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104686109 (CUL4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104686109 (CUL4A)
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104686109 (CUL4A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccw04147]
    104686109 (CUL4A)
Ubiquitin system [BR:ccw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     104686109 (CUL4A)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104686109 (CUL4A)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104686109 (CUL4A)
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104686109 (CUL4A)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 ADH_zinc_N
Other DBs
NCBI-GeneID: 104686109
NCBI-ProteinID: XP_039405617
LinkDB
Position
1:complement(92060969..92096989)
AA seq 765 aa
MADEPQKKPHLSALVGHTNGLTKPASLAATATRAAGGGGGGATASSKKLVIKNFRERPKL
PDNYTQDTWQKLHEAVGAIQSSISIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHV
KAQILQFREDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMG
LELFRNHIISDKQVQTKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKESFEQR
FLEETNCLYAAEGQRLMQEREVPEYLHHVNKRLEEEGDRVITYLDHSTQKPLIACVEKQL
LGEHLSAILQKGLDNLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVN
PEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKYVD
SKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKS
MLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQSDPGNIDLTVNILTMGYWP
TYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLF
QTLVLLMFNEGDEFSFEEIKMATGVEDSELRRTLQSLACGKARVLIKNPKGKEVEDGDKF
IFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNL
LVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggcggacgagccgcagaagaagccgcacttgtcggccttagtgggacacacgaacggg
ctcaccaagcccgcctcgctggccgccaccgccacccgcgccgcgggaggaggaggcgga
ggcgcgaccgcctcctccaagaaactcgtgatcaagaacttcagagaaagacccaaatta
ccagataattatactcaggacacctggcagaaacttcatgaagcggtgggagcaatacag
agtagtatttctattaaatacaaccttgaagagctctaccaggctgttgaaaatctctgc
tcctacaaagtctctgctacactgtacaagcagttgcgacaagtctgtgaagaacatgtg
aaggcacaaatccttcagtttagagaagattctctggatagtcttttatttttaaagaag
ataaataaatgctggcaagatcattgcagacaaatgatcatgatcagaagcattttctta
tttttggatcgtacatatgtgcttcagaattcaatgcttccttctatatgggatatgggg
ctagagttatttagaaaccatatcattagtgacaagcaagttcaaaccaagactattgat
ggaattctcctgctgattgaacgagaacgaaatggtgaagctgtggacagaagtttgctg
cggagtttgttgagcatgctctcagatttgcaggtttacaaggaatcatttgaacagagg
tttctggaagagacaaattgtttatatgctgctgaaggccaaagattaatgcaagaaaga
gaggtcccagaatatcttcaccatgttaataaacgtttggaagaagaaggagatagagta
ataacatacttagatcacagcacacagaaaccactgattgcttgtgtggagaagcagctg
ctaggagagcacttatcagctattttgcaaaaaggacttgataacctacttgatgaaaat
agaatatcagacttgacccagacgtaccagctgttcagccgggtaaaaggtgggcagcag
atccttttgcagcattggagtgaatacatcaagaactttgggacaacaatagtggttaat
cctgaaaaagacaaggatatggtgcaagagctactagattttaaggataaagtggaccat
atcatagaagtgtgctttcagaaaaatgaaaaatttataaacttgatgaaggagtccttt
gaaacatttatcaacaagagaccaaataagcctgcagaattgatagcaaaatatgtggat
tccaaattaagagctggtaataaagaagcaacagatgaagaactggaaagaatccttgac
aaaatcatgatcatatttagattcattcatgggaaagatgtgtttgaggcattttataag
aaagacttggccaaaagactgctggttggaaaaagtgcatcagtagatgctgagaagtcc
atgttgtcaaagcttaagcatgaatgtggtgctgcttttaccagcaaactggagggcatg
ttcaaggacatggaactgtccaaagatgtcatggtacagtttaagcagtatatgcagaac
caaagtgacccaggaaatatagacctgacagtaaatattttaactatgggatattggcca
acttatacacctatggaagtccacctaaattctgagatgataaaacttcaagaggtattt
aaaaccttttacctgggaaaacacagtggtcgaaaacttcagtggcagaccactttagga
catgctgtcctaaaggcagaatttaaggaagggaagaaggagtttcaagtatcgctcttt
cagacattagtattgcttatgtttaatgaaggggatgaattcagttttgaagaaattaaa
atggccactggcgtagaggacagtgaattaagaagaaccttgcagtctttagcttgcggg
aaagcacgagtattgattaaaaatccaaagggcaaggaggtagaagatggagataaattc
atctttaatggtgatttcaagcataaattgtttagaataaagatcaaccagattcaaatg
aaagaaacagttgaggaacaggtcagcacaactgaaagagtatttcaggacaggcaatac
cagattgatgctgctattgtacgaataatgaagatgagaaagactcttggtcataatctt
cttgtttcggaattgtataatcagctgaaatttcctgtaaagcctggagacttgaaaaag
agaattgaatctctcattgacagagactatatggagagagacaaagacaaccccaatcag
taccactatgttgcataa

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