Corvus cornix (hooded crow): 104686143
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Entry
104686143 CDS
T03546
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X2
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104686143 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104686143 (MID1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104686143 (MID1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104686143 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
104686143
NCBI-ProteinID:
XP_010392684
LinkDB
All DBs
Position
1:complement(98409829..98560157)
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctagagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccagtggagtctatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcattgacaggtttcagaaagcctcagtcagtgggcccaattcccccagcgagacc
cgccgggagcgggcgttcgataacaacagcatgtcgtcctgcgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggcggtgaaaacctgcgttacctgcgaggtgtcc
tactgcgaggagtgcctgaaagccactcaccccaataagaagccattcaccggccaccgt
ctcatcgagcccatcccggactctcacatcaggggattaatgtgcttggagcatgaggac
gagaaagttaacatgtactgtgtgactgatgaccagttaatttgtgccttgtgtaaactg
gtcgggcgacaccgtgaccatcaggtggcagctttaagtgaccgctatgacaagctaaag
caaaatttggagagtaacctcaccaaccttattaagaggaacactgaactggaaactctt
ctggcaaaactcattcagacctgtcaacatgtagaagtaaatgcctcccgccaagaaacc
aagctaatggaagaatgtgaccaactcattgaaataatccagcaaagacgacaaataatt
ggaaccaaaatcaaggaaggaaaggtggtgaggttgagaaaactggctcagcagattgca
aactgcaaacagtgcatcgagcgctcgacatccctcatctctcaggctgagcagtcgctg
aaggagaatgatcacgctcgcttcctgcaaacagctaaaaacatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaacgatacttttgat
actttcgcactcgattttaccagggagaagaaattgttggaatgccttgattaccttaca
gctcccaacccacccaccattcgagaagagctctgtacagcttcttatgataccattact
gtgcactggacatcagatgatgagttcagtgtagtctcttacgagctgcagtacaccatc
ttcactggacaagccaacgttgttagtttatgcaactcagccgacagctggatgattgtt
cctaatatcaaacaaaaccactacacagtgcatgggctgcagagtggcacaaagtacatc
ttcattgttaaggccattaatcaggctggcagccggagcagcgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgcccatagaaaattgaaagtgtct
catgataacttgacagtggaacgggatgaaacatcatccaaaaagagtcacacaccagag
agattcacgagccaagggagctacggagtagctggcaacgtgttcatcgacagcgggcgg
cattactgggaagtggttataagtgggagtacgtggtatgctattggtatttcctacaag
tcagcaccgaagcatgagtggattggaaagaattctgcctcctgggtgctttgccgctgc
aataacacgtgggtggtgcggcacaacagcaaagaaatccccatcgagcccgcgcctcac
ctccggcgggtcgggattttgctggactacgacaacggttcccttgccttttatgatgct
ttgaactccctacacctttacacttttgacattacatttggccagccagtgtgccccacg
ttcacagtgtggaataaatgtttgaccattataactggcttgcctatccctgaccaccta
gactcctccgagcagctcgcatga
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