KEGG   Corvus cornix (hooded crow): 104686175
Entry
104686175         CDS       T03546                                 
Symbol
RBBP7
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K11659  histone-binding protein RBBP7
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03082  ATP-dependent chromatin remodeling
ccw03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104686175 (RBBP7)
   03083 Polycomb repressive complex
    104686175 (RBBP7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccw03036]
    104686175 (RBBP7)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     104686175 (RBBP7)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     104686175 (RBBP7)
    PRC2.2
     104686175 (RBBP7)
  Chromatin remodeling factors
   NuRD complex
    104686175 (RBBP7)
   NuRF complex
    104686175 (RBBP7)
SSDB
Motif
Pfam: CAF1C_H4-bd WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd WD_LRWD1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_1st Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 eIF2A MIOS_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40
Other DBs
NCBI-GeneID: 104686175
NCBI-ProteinID: XP_039406828
LinkDB
Position
1:complement(101635190..101643859)
AA seq 443 aa
MASKDGRSPRSALPGRALGCEVLEDTVEERVISEEYKIWKRNTPFLYDLVMTHALEWPSL
TVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVAGVQIPSNDQFGALQYDSEKGEFG
GFGSVTGKIEMEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGE
CNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHMVCLWDISAGPKEGKIVEAKAIFTGH
SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNATSKPSHSVDAHTAEVNCLSFNPYSE
FILATGSADKTVALWDLRNLKLKLHSFESQKDEIFQVHWSPHNETILASSGTDRRLNVWD
LSKIGEEQSAEDAEDGPPELLVPFCSGFSVLTCCVAVMSCHCAAKTAAVRKSFHLPGFQS
FALLCCRLPLFSSEGFPISCVTL
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggcgagcaaggacggtaggagcccccgctccgctctccccggccgggcgctggggtgt
gaggtgctggaggacacggtggaggagcgtgtcatcagcgaggagtacaagatctggaag
aggaacacccccttcttgtacgacctggtgatgacacacgccctggagtggcccagcctc
acggtgcagtggctgcctgatgtgaccaggccagaaggaaaggattatgctctgcactgg
ctggttttgggaacacacacgtctgatgaacagaaccacctggttgttgccggagtccag
attcccagcaatgatcagtttggtgctttgcagtatgacagtgagaaaggagaatttggt
ggctttggatctgtgactggcaaaattgagatggagattaaaattaaccatgagggtgaa
gtgaaccgtgcccgatacatgccgcagaacccctgcatcattgcaacaaaaacaccctct
gctgatgtgctggtgtttgactacactaaacatccttcaaaaccagacccgagtggagag
tgtaatcctgaccttagattaagaggacaccagaaggaaggctatggcttatcatggaac
tcaaatttgagtggacatcttctcagtgcatcagatgatcatatggtgtgtttatgggat
ataagtgctggacccaaagaaggcaagattgttgaggcaaaagccatctttaccgggcac
tctgcagtagtggaagacgtggcatggcacctgctccatgagtctctgtttggatccgtg
gcggatgatcagaagcttatgatttgggacacaagatctaatgccacgtccaagccgagt
cactcagtagatgctcacacagccgaggtcaactgtctgtccttcaatccttacagcgag
ttcattctggcaactggctctgctgacaagacggtggctctatgggatcttcgaaactta
aagctgaaactccattcttttgagtctcaaaaggatgagatttttcaggttcactggtct
cctcataatgaaaccattcttgcttcaagtggtaccgatcgtcggcttaacgtatgggat
ctaagtaaaattggagaagagcagtctgcagaggatgcagaagatgggcctcctgagctg
ctggtacccttttgttcaggtttcagtgtgctgacatgctgtgtggcagtgatgtcttgt
cactgtgctgctaaaactgcagctgttcgtaaatcttttcacctccctggtttccagtcc
tttgctctcctttgctgtaggcttcctctgttcagttctgaaggtttccccatttcgtgt
gtgactctgtaa

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