Corvus cornix (hooded crow): 104686249
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Entry
104686249 CDS
T03546
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104686249 (TRAPPC10)
Membrane trafficking [BR:
ccw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104686249 (TRAPPC10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
NTS_TR130
UFD1_N1
PPC
Motif
Other DBs
NCBI-GeneID:
104686249
NCBI-ProteinID:
XP_039408633
LinkDB
All DBs
Position
1:complement(112642107..112680123)
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AA seq
1266 aa
AA seq
DB search
MDPADEEEGREKPPVIYTMENKPIVTCAGDQNLFTSLYPTLSQQLPREPMEWRRSYGRAP
KMIHLESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKTTVKDDITKWQNVLK
AHSSMDWLIVVVESDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRSQ
ESWNAFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEML
QQFEDALVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVRSWNGLILRKPIDMEKRELI
QNQEATLLDLRSYLFSRQCTLLIFLQRPWEVSQRALELLHNCVQELKLLEVSVPPGALDC
WVFLSCLEVLQRIEGCCDRAQIDANVSHTVGLWSYATEKLKSLGYLCGLVSEKGPNSEDL
NRTVDLLAGLGAERPETANASQSPYKKLKEALSSVEAFEKHYLDLSHATIEMYTNIGRIR
SAKLVGKDLAEFYMRKKGPQKAEVYLQGALKTYLAEGWALLVTHTRKQLAECQKQLGQIE
NYLQTSSLLAGDNHLTEEERKRFCQEILDFANQQAENQGQKVILPMHSFAQLKTLHFDPP
NAVVHVGGKLCIELTLLSQMPIPVRVDQVAIHVHFSIEKNSYRKTAEWLTKHKTSNGVIS
FPNEIAGLPLSRNNLPALELCEMYERSPSDNSLNTAGIICKNTHMLLRRQESSTSLDVPS
GLTLEDGAHVLKCNNLTLEPGDNKITFNIQAKEPGTYTLRQLCTSVGKVQFVLLHIYPIV
QYDVYSQEPQLKVEPMTESLLAGIPQKVKFTVTTGHYTMKSGDTLQLSNADAMPILYHPE
SKAVIYSNTRGKPEKISESSLRIQSSEKITSISLPVAPAYHVIEFELEVMYLPSATESAV
EKENTTNKESHRRKKEKQKQDNCMATVDQKVTIDCPWSIYSTIIALTFCIPFNAKHSLLS
AGKRKYVQVCVQNLSELCFQLSDYSLKNSAECTDLQLVPLNPASQQVVYSKQSIFFVWEL
KWTKELPLSLQCLFSVSFCPATSEEQSLTLKPFTYEFQVENFFTLYHVKTEIFPPLDAEY
CKTGSLCSLEVSITRLVELSEVDRDEALTESDGYCTTKLMYEVVDNSSNWAVCGKSSGVI
SMPVAPRATHKVHMEVMPLFAGYLPFPDVRLFKYLPHHSAHSMQLDADSWIENDNLSVDK
NVDEQADSSSIRSRGSLHSTASGEHKGLPMPRLQPFSPGQVFNSSTGMQILVIPSKDDHV
LEVNVT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgatgaggaggagggcagggagaagccccccgtgatttacaccatggag
aacaagcccatcgtgacctgtgctggagatcagaatttatttacttccttgtatcctaca
ctttctcagcagcttcctagagaacccatggaatggaggaggtcttacggccgtgctccg
aagatgattcacctggaatccaactttgttcagtttaaagaggagctactacccaaagag
gggaataaggcccttttgacttttccctttcttcatatttattggacagaatgttgtgac
acggaagtgtacaaaaccacagtcaaggatgacatcaccaagtggcagaatgttctcaaa
gctcacagctcaatggactggctgattgtggtggttgagagtgatgccaagaaaaagaac
aaaaccaatatccttccccgaacctctatagtagataaaataaggaatgacttctgtaac
aagcaaagtgacagatgtgtggtactttctgaccctttgaaagactcttcccgttctcag
gaatcttggaatgccttcctgactaaactcaggacattgcttctcatgtcctttaccaaa
aacttaggcaagtttgaagatgacatgagaactctgagagagaaaaggacagagccaggg
tggagcttctgcgagtatttcatggtccaggaagagctggcctttgtctttgagatgctg
cagcagtttgaggatgcactggtgcagtatgatgaactggatgccttgttctctcagtat
gttgtcaacttcggggctggtgatggtgcaaactggctgacgtttttttgccagccagtg
aggagctggaatggtttaattctgcggaaaccaatagacatggagaagagagagctcatt
cagaaccaagaggcaacactgctggacctgcgcagttacctgttctctcgtcagtgcacc
ttgttaatcttcctgcagaggccatgggaggtttcccagagagcactggagcttcttcac
aactgtgtgcaagaactcaagctactggaagtctcagttcctcctggagctttggattgc
tgggtgtttttgagttgcttggaagtcttacagagaatagaaggctgctgtgatagggct
caaatagatgcaaatgtttcccacacagttggcctgtggagctatgccactgagaagtta
aaatctctgggttacctgtgtggacttgtatcagagaagggacccaattcagaagacctt
aacaggactgtggatctgttggcagggctgggagcagaacgccctgaaacagccaatgca
tcacagagcccttacaagaaactcaaagaggccttatcatctgtagaagcttttgaaaaa
cactacttagatctgtcccatgccaccattgaaatgtacacaaatattggaagaattcgc
tcagctaagcttgtgggaaaggacttggcagagttttatatgaggaagaaaggtccccag
aaggcagaggtgtatcttcaaggagcactgaaaacctaccttgctgagggctgggcactg
ctggtcacacacacgaggaagcagctggctgaatgtcagaaacagcttgggcagatagaa
aattatctccaaacaagcagccttttagctggtgataatcacctaacagaagaggaacgc
aaaagattttgccaagaaatactagattttgccaatcagcaagcagagaaccaaggtcaa
aaggttattttgcctatgcactcctttgcccagctgaaaactctgcattttgaccctcca
aatgctgttgtccacgtgggtggaaagttgtgcattgagttgactttgctgagccaaatg
cccatccctgtccgggtggaccaggttgccatccatgttcacttcagcattgagaagaac
agctacaggaaaacagccgagtggctcaccaagcacaaaacttccaacggtgtcatcagc
ttcccaaatgaaattgcaggcctgcctttgtcaagaaacaacctgccagccctggagctg
tgtgagatgtacgagcggagcccctcagacaactccttgaacacagcaggaatcatctgc
aaaaacacgcacatgctgctgcggaggcaggagagcagcacttccctggacgtgccctcg
gggctcactttggaagatggggctcatgtgttgaagtgcaacaacttgacactggaacca
ggggacaataaaataaccttcaatattcaggccaaagaacctgggacatacacgctcagg
cagctgtgcacttcagtgggaaaggtgcagtttgtccttcttcacatctacccgatcgtg
cagtatgatgtgtactcccaggagccccagctcaaagtggagcccatgactgaaagcctt
ttggctggcattccccagaaggtgaagttcacagtgaccactggtcactacaccatgaag
agcggggacactctgcagctcagcaatgcggatgccatgcccatcctgtaccaccctgag
agcaaggcagtgatctactccaacaccaggggtaagccagaaaagatctcagagtcatcg
ttaaggattcagtcttcagaaaagatcacaagcatcagcttgccagtggctcctgcatat
catgtgattgaatttgaactagaagtcatgtatttgccatcagccacggaatctgcagtg
gagaaggaaaatactacaaataaagaaagtcacagaagaaagaaagagaagcagaaacag
gacaactgcatggctactgttgatcaaaaagtgaccattgattgtccttggtcgatttac
tccacaattattgcattaacattctgcataccctttaatgccaagcattccttgttgtca
gctggcaaacggaaatatgtgcaagtctgtgtacagaatttgtcagaactctgtttccag
ctttcagactacagcctaaaaaattctgctgagtgtacagatttgcagctggtacctctc
aaccctgcatctcaacaggtcgtgtacagtaagcaatcaatattctttgtatgggaattg
aagtggacaaaagagcttcctctctccttgcagtgcctgttttcagtcagcttttgtcca
gctacctctgaagaacagtctcttaccctgaagccgttcacttacgaattccaagtggaa
aatttttttacattataccatgtgaagactgaaatcttcccacccttggatgcagagtac
tgtaaaacaggctcgctctgctccttagaggtgtccatcacccggcttgttgagctctcc
gaggttgacagagatgaagcattaacagaatcagatggatattgcacaacaaaactcatg
tatgaagttgttgacaacagtagtaactgggcagtctgtggaaaaagctctggagtgatt
tctatgcctgtagcacctcgagcaactcacaaagtccacatggaagtgatgccactgttt
gctgggtatctgcctttccctgatgtcagattgtttaaatacctccctcaccattctgct
cactccatgcagcttgatgctgatagctggattgaaaatgacaacctgtctgtggacaag
aatgtggatgagcaggctgacagcagcagcatcaggagcagggggagcctgcattccaca
gccagtggggagcacaagggtctgcccatgccgcggctccagcccttctccccgggccag
gtcttcaacagcagcacagggatgcaaatccttgtcattcccagcaaggacgaccacgtt
ctggaggtcaacgtcacgtga
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