Corvus cornix (hooded crow): 104686321
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Entry
104686321 CDS
T03546
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03272
Virion - Hepatitis viruses
ccw03273
Virion - Lassa virus and SFTS virus
ccw04140
Autophagy - animal
ccw04142
Lysosome
ccw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104686321 (LAMP1)
03272 Virion - Hepatitis viruses
104686321 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104686321 (LAMP1)
04142 Lysosome
104686321 (LAMP1)
04140 Autophagy - animal
104686321 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104686321 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104686321 (LAMP1)
04090 CD molecules [BR:
ccw04090
]
104686321 (LAMP1)
Membrane trafficking [BR:
ccw04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104686321 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
104686321 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
104686321 (LAMP1)
Exosome [BR:
ccw04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
104686321 (LAMP1)
CD molecules [BR:
ccw04090
]
Proteins
104686321 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
104686321
NCBI-ProteinID:
XP_039405634
LinkDB
All DBs
Position
1:complement(92036872..92056193)
Genome browser
AA seq
416 aa
AA seq
DB search
MARRLLAAAALLGFLQASSSFEVKDSSGKVCIIADLTVAFSVEYKNNGQKQFVHFFLPQN
ASVDSQSSCGKDNASHPVLILDFGAGHSLSLNFSESADKYQVEELVFHYNLSDATLFPNS
TAGVVKTVSHKSIIQAHRGTKYRCTNSKHINMKAVNVTFSNVTLEAYLTNGTFSVNTTEC
AEDMVSTTTIVPTTPKQTTSQVPTTGPAPTSSPPNPAVGKYNVTGPNGTCVLAYMGLQLN
ITYPKKDEKMGLYLLNLIPRNTTSSGTCNNTSALLNLTFEKTRVIFQFALNASAEKFFLQ
GVSVSTTLPSEAKNPKFEASNNSISELRASVGNSYKCSSKENLQVTDQALVNVFNVQIQV
FKIDGDKFGPVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcggctgctggcggcggccgccctgctcggctttttacaggcttcctcttca
tttgaagtgaaagattcaagtggtaaggtctgcataattgctgatttgacagtagccttc
tcagtggaatacaaaaacaatgggcaaaaacagtttgtacacttttttcttccacaaaat
gcttcagtagactcacagagctcatgtggtaaagataacgcatctcatccagttttgata
ctggattttggagcaggacattcattaagcctgaatttctcagaatctgcagacaagtac
caagttgaagagttagttttccactacaatctgtcagatgcaactttattcccaaattca
actgcaggagttgtgaagactgtatcacataaaagtattattcaggcacataggggcaca
aaatacagatgcaccaactccaagcacatcaatatgaaggctgtgaatgttactttcagc
aatgtcactttggaagcctatctcacaaatggcactttcagtgtgaacacgacggaatgt
gctgaagatatggtctctactactactattgtgcctacaactcctaagcagactactagc
caggttccaacaactggcccagcaccaacctcatcacccccaaatcctgcagttggtaaa
tacaatgtgactggtccaaatggaacctgtgtacttgcttacatgggcttacagcttaat
atcacctatccaaaaaaagatgaaaagatgggtttgtatttgctgaatctcataccacgg
aatacaacttcttctgggacatgcaacaatacatctgccttgctgaatctgacttttgag
aaaacgagggttatcttccagtttgcattgaatgcaagtgctgaaaaattcttcctgcaa
ggtgtgagtgtaagcacgactctgccttctgaagcaaaaaatccaaaatttgaagcatca
aacaacagcataagtgagctgagagcttcagttgggaactcctacaagtgcagttccaag
gagaatctgcaggtcacggaccaagcccttgtcaatgtatttaatgttcagatccaggtt
ttcaagattgatggagacaaatttgggccagtggaagaatgtcaactggatgaaaataac
atgctgatccctataatagttggtgcagcccttgctggtcttgttctaattgtcttgatt
gcttacctgattggcagaaagaggagccatgctggatatcaaacaatttaa
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integrated database retrieval system
