Corvus cornix (hooded crow): 104686351
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Entry
104686351 CDS
T03546
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04136
Autophagy - other
ccw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104686351 (ATG2B)
04136 Autophagy - other
104686351 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104686351 (ATG2B)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104686351 (ATG2B)
Membrane trafficking [BR:
ccw04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104686351 (ATG2B)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104686351 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
104686351
NCBI-ProteinID:
XP_010393031
LinkDB
All DBs
Position
5:13879951..13926943
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTDGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLNQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKSGTALEIRVERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSFFWDEFPASAKSS
PVCSATQLATEPKLSPSWNPKIIYEPHPQLTRSLPEITPSDPVQICKLIGRMELSLTLKQ
NEVLPGAKLDIDGQVDSIHLFLSPRQVHLLLDMVAAIAGPESLSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETESARTPSSREEEVFFSMAEMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSTTVLQPTWGDFLDRNKQELQPARGSSLTAN
MVHQTSLRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPESSLNLNPLTPM
ARDFFARIEKIEPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQRTASRSFS
TDLSIGNMEFLECLFSTDSHSMQPHYTELLTFHSEERNDSHSMPCLQLHYKHLDNRGPQG
SQGRLSSVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHI
SLHKAFTEVFLDDSHAPANCRISVQVTAPALNLSVRFPIPDLRSDQERGPWFKKSLQKEI
LHLEYTDLEFKTEFIGGSTPEQVKLELTFKELTGSFEEDNAETPVKFFQVSGGTDGDITS
SSDNFDWPRIVLKINPLAVHSILERIAAEEEEGDNNFQEEEEGGSHSLKDVCDIRRPEPS
PFSSRRVMFENEEMVMPGDVVEMTEFQDKTISNSHYVLELMLPNIHLTLPNKSFYEKLYN
RISNDLLLWEPTAPSPVETFENLSYGVGLSVASQLINTFSKDSFSQFKSAVHYDDESGSE
EETLQYYSTVDPNYRSRRRKKLDSQNKNSQSFLSVLLNVTHGLVSVFTDVKQDDGNTLEG
KYGEFWVEFNSGSLFSVTKYEGFEDRHYVCLHSSSLNLYHQGLVDGVVPSSEVRLPSTIR
PHWLEPTICFSEEDGLSRTTSDGVGVDSPSMLTVAVKIQSDKIESNTKEFLVAVGLRGAT
LQHRVLPSGLSWHEQILYFLNISDEPVLGYNPPATITTFHVHLWSCALDYRPLFLPVRSL
LTVETFSISSSVAVDKSSSTLRIILDEAALHLSDKCNTVMVNLHRDYVRVMDMGLLELTI
TAVKSDSDGERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPTKTEVKR
GVSKPKMKVETFSQPSSHGPGLAESEQQILRDLMSDAMEEIETQQTASAMKQESNGVLDD
KSQTQEPSCSDLFLFPDESGNVSQEPSPTYASFTHHLLSEAMGDVPAESDDFCILFAPKV
AVAEKEEEPVIKIMVDDAIVIKENHFSQPIKKTDTSKAPLHFPVPLVRYVVKEISLIWHL
YGGRDFGTAPPTSPAKSFISPHSSPSHTPTRHGRNTACGGRGRNPDFLMEIQLSKVKFQH
EVYPPGGAEGESCLLEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNM
LTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLVTPDPE
VKKSPGAEVTCSLPRHVSSLKEPSPVISFSSHKQANENGSIDSMDVVNGDDDHFSQETTS
YNDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHG
LLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPTFTEAKKIKRFPRH
RLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPTVV
KPFIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttctcggagtctatcaagaagagagcctgcaggtacctgctgcagagg
tacctgggccacttcttgcaggagaagctcagcctggaacaactcagcctggatctctac
cagggcactggctccttgacgcaggtccctctggataagtggtgtcttaatgagatcctg
gagtctgctgatgcacctctggaagtcacagatggatttatccaatcaatttctttatct
gtcccgtgggggtcattgctgcaggataactgtgcattagaagtaaaaggattagagatg
gtcttcaggccaaggccaaggcttgcatctggatctgagcccatgtattggtcaagtttt
atgaccagtagtatgcagcttgcaaaagagtgtcttaaccaaaaattgacagatgaacaa
ggagaagggtcccagccttttgaaggacttgagaagtttgcagaaactattgaaacagtt
ctaagaagggtgaaagttacctttttagatactgtgttgcgaatagaacatgtgccggaa
aactctaaaagtggaacagcgcttgaaatcagagttgaaagaactatgtactgtgatgaa
actgcagatgagtgctctggaattaatgtacatcagcccacagcttttgctcacaaatta
ctgcagctctcaggtgtctctttcttttgggatgagtttcctgcatcagcaaagtcctcc
ccagtgtgttcagctacacagctggcaactgaaccaaagctttcacctagctggaatcca
aaaatcatttatgaaccccatccacaactaacaagaagcttgccagaaattactccttct
gaccctgtacagatctgtaagctgattggtagaatggagttaagcctaacattaaagcaa
aatgaagtccttcctggagctaagttggatatagatggacaagtagattctatacatctg
tttctgtcgccaaggcaggttcatcttctcttggacatggtagcagctattgcaggacca
gagagtctaagcaggatagaattgtcaaataaagataggaagaaccggccaatgcaacag
gaggatgagtatcggattcagatggagttgaaacgttatttaagaaaagagtctttatct
gcaggagcatcatctgaacaaagcttctatgagacagagagtgccagaacgccttctagt
cgtgaggaagaagttttcttctcaatggctgaaatggacatgtctcacagcctttcttct
cttccacctcttggagaccctccaacgatggatctagacttgtctttaactagtacatac
acaactacgccagcaggatctccactgagcactacagtgctgcaaccgacttggggtgat
tttcttgatcgtaacaaacaagaattacagcctgcaagaggttcttcactaacagccaat
atggttcaccagacttccttaagaaggacatctattccatccagatctgtttctgtggat
gaatccagacctgagctactttttagactggcagttggaactttctcagtgtctgtactt
catattgaccctttaccccctcctgaaagttcactgaaccttaacccattgacaccaatg
gctcgggatttctttgcccgaatagaaaagattgagccagttaagttttcaacagaagat
tttctgtccttccgagaagtatttgcagaagcttgttctcatgatcaccttaggtttata
ggtactggcatcaaagtgtcttatgaacaaagacaaaggactgcctctcgaagttttagt
actgacttatccattggaaatatggagttcctggaatgccttttttctactgactctcat
tccatgcagcctcactatacagagctgctgacatttcattctgaagaaagaaatgattct
cattctatgccatgccttcagctgcattataagcatttagataatagaggacctcagggt
agtcaagggagactcagttctgttccacagaaagcagaattacaaataaagttaagtcca
gtgttttgtgagctggatattagtattgtagacagattaaattccttacttcaaccccag
aaactgactacagtggagatgatggcatctcacatgtatgcttcttacaataagcacata
agtctgcataaagcatttactgaagtttttctggatgattcacatgctcctgcaaactgt
agaatttcagttcaagtcactgccccagcattaaatctctctgttcgtttcccaatacct
gatctacggtcagatcaggaaagaggaccatggtttaagaaatcacttcagaaggagatt
cttcatcttgaatatacagatctggaatttaaaactgaatttataggagggtcaactcca
gaacaagttaaattagagcttacctttaaagagctaacgggttcgtttgaagaagataat
gcagaaacaccagtaaaattttttcaagtgtctggtggcacagatggagatataacatca
tcatcagacaattttgactggcctcggattgtattgaaaataaaccctctggctgtgcac
tctattctggaaaggatagcagctgaggaggaagaaggtgataataactttcaagaggaa
gaagaaggagggtctcattctttgaaggatgtctgtgatattagaagaccagagccttct
cctttttcttctcgtagggtcatgtttgaaaatgaagagatggtgatgccaggagatgta
gttgaaatgactgagtttcaggataaaacaattagcaattctcattatgtactggaactc
atgttaccaaacattcacttaacattaccaaacaaaagcttttacgaaaaactttacaac
aggatcagcaatgatttattattgtgggaacccacagctccatctcctgtagaaacattt
gaaaacctttcttatggtgttggactctctgtggccagccagctcatcaacactttcagt
aaagacagctttagtcaatttaaatctgcagttcattatgatgatgaaagtggatctgag
gaagaaacactgcaatattattccactgttgatccaaactatcgttcacgcagaaggaaa
aagcttgactcacagaataagaactcacaaagctttctgtctgttctgctaaatgtgaca
catggattagtgtcagtattcacagatgtgaagcaggatgatggaaatacactcgaagga
aagtacggcgaattttgggttgagttcaacagtggctccctcttcagtgtgactaaatat
gaaggctttgaggacagacactatgtctgtctccattctagcagcctcaacttatatcat
caaggtttagtagatggagtcgtcccttcctctgaagtacgactgcccagcacaatacgt
ccccattggttagagcctactatttgtttttctgaagaagatggtcttagtaggactact
tcagatggtgtaggagtggatagtccaagtatgctgactgttgcagtcaaaatccaatca
gataaaatagagagcaatacaaaggaatttctggttgctgttggactacgaggagccacc
cttcagcaccgagtgctgccttcaggtttaagctggcatgaacagattttatattttttg
aatatttctgatgagcctgttctgggatataatcctccagctacaattacaacttttcat
gtacatctgtggagttgtgctcttgattataggcccttgtttttgccagtcagatctcta
cttactgttgaaactttcagcatttccagcagtgttgcagtagataaatcctcttctact
ctcaggataattttagatgaagctgctttgcatttgtctgacaagtgcaacactgttatg
gtgaacctccatagagattatgttcgtgttatggatatgggactgctggaactaaccatt
acagcagtgaaatctgattctgatggagaaagaactaagccacgttttgagctgcactgt
tccagtgatgtaatccatattcgtacctgctctgattcatgtgctgcactaatgaatctc
atacaatatattgcaagttatggtgatttacatccacccactaagacagaagttaaacgt
ggagttagcaagccaaaaatgaaggtagagacctttagccaaccatcttcccacggacca
ggcctcgctgaatcagagcagcagattttacgggatttgatgagtgatgcaatggaagaa
attgagactcaacagactgcttctgccatgaagcaagagtctaatggggttttggatgac
aaatctcaaactcaggaaccatcttgctcagatctcttcctgtttccagatgaaagtgga
aatgtctcacaagagccaagtcccacttatgcttcatttactcatcacctgttaagtgag
gccatgggagatgttccagcagaaagtgatgatttctgcattcttttcgcacctaaagtt
gctgttgctgaaaaagaggaagagccagttataaaaataatggttgatgatgcaattgtt
ataaaggaaaatcatttcagccaacctataaaaaaaacggatacaagcaaagctcccctt
cattttcctgttcctcttgtacgctatgttgtaaaggaaatatctcttatttggcatctt
tatggtggaagggattttggaactgcaccaccaacttctccagctaaaagtttcataagt
ccccatagttctccttctcatacaccaacaaggcatggacggaatacagcatgtggagga
agaggaagaaacccagacttcctaatggaaatacagttaagcaaggtgaaattccagcat
gaggtgtatcctccaggtggtgcagaaggtgaatcctgtctgttggagcagccagtgtca
cgacaagtttttattgttcaggacctggagatcagagatcgcttagcgacatcacagatg
aataaatttctctatctctactgcagtaaggagatgcccagaaaagcacattcaaacatg
ttgacggttaaagcattgcacgtccgtccagagtctggcagatccccacaggaatgttgt
ttacgtgtttcactaatgccacttcgcctcaatattgaccaggatgccttgtttttcctg
aaggactttttcactagcctttctacagaagtagaactcttagttactccagatcctgaa
gttaaaaagtctcctggtgctgaagttacgtgtagtttgcctaggcatgtcagcagcctt
aaggaaccaagtccagtcatttctttttcatcacacaagcaagcaaatgaaaatggcagc
attgattctatggatgtggttaatggagatgatgatcatttctcacaagaaacgacatca
tacaatgatcagccagtatttttcagagaatttcgctttacctcagaagttccaatacgt
ctcgattaccatggcaagcatgtgtcaatggatcagggaacactagctgggattcttatt
gggcttgctcagttgaactgctcagaattaaagctgaagaggctttgttacagacacggt
ttattaggtgtggataaattgttctcctatgccatcagtgaatggcttaacgatataaag
aaaaaccagctaccgggaattttgggaggagtagggcctatgcattcacttgtgcagtta
gtgcaaggtctgaaagacctggtatggttgccaatagagcagtaccgcaaggatggtcgt
attgtcagaggctttcaaagaggagcagcttcctttggtacttccactgcgatggcagca
ctggagctaacaaacagaatggttcagactatacaggcagctgcagaaactgcttatgac
atggtatcaccagggcctacctttactgaagcgaaaaagatcaaacggttccctcgccat
cgcttggctcatcagccggtcgacctgcgggagggtgtagccaaagcgtacagtgttgtg
aaagaggggattacggacacagcccaaaccatctatgagactgctgctcgtgagcatgag
aacagaggagtcactggagcagtaggaggagtcctccgccaaattccaccaactgtggtg
aaacctttcatcgttgcaacagaggcaacctcaaacgttctgggtggaatgagaaaccag
atcaggccagatgtgcgtcaagaagagtctcagaaatggcgccttggggaggattga
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integrated database retrieval system
