KEGG   Corvus cornix (hooded crow): 104686375
Entry
104686375         CDS       T03546                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM7
  KO
K12000  tripartite motif-containing protein 7
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104686375
Ubiquitin system [BR:ccw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104686375
SSDB
Motif
Pfam: SPRY PRY zf-B_box zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_4 zf-RING_5 zf-C3HC4_3 zf-RING_2 DUF885 zf-Nse Prok-RING_4 zf-RING_6 RING_XB3-XBAT31 Sina_RING zf-ANAPC11 Cas_Cas7 CowN Syntaxin-18_N DDE_Tnp_ISL3
Other DBs
NCBI-GeneID: 104686375
NCBI-ProteinID: XP_039405609
LinkDB
Position
2:complement(763498..769320)
AA seq 469 aa
MAREVLGLGKQLAAEATCPLCLDLFAQPVLTACGHSFCGQCLEGVLGDPPRRAACPQCRA
AVEPGSLRPNRSLGAMAGLARALEEVAARPLCPEHGELLALFCEPCAAPLCALCRDGPGH
RQHRVRPADEAARELRETLQSNLLFLQKQKEKLKPKGDQKTDDLLMTVVSEAQRVRDTFE
ELQQFLKEQEKIFLAQLERMSQELLEKSHEYSSRVSERDSLLDTVIAQIEEKRDQPVVEF
LMDVGKILSSCEAAKAPIPEPVSPELQRSVESLSEMSQLIVDMVAKFKVNLQKQIDSEKE
TVMLDPETASPHLTLSEDYKTIRLGGGKQNLPDTSKRFTGSPSVLGSRGFTSGRHYWELE
VGKGNSWAVGVALESVQRKESLSLAMGKIWALRLDWDDQYRALRMPPVLLEVREELHRIR
VHLDYEAGRVTFYNAESMTQILQFEATFTEKVFPYFWLWSRETHIQLCD
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggctcgagaggtgctgggtctgggcaagcagctggcggccgaggccacctgcccgttg
tgcctggatctgttcgcgcagcccgtgctgacggcgtgcgggcacagcttctgcgggcag
tgcctggagggcgtgctgggggacccgccgcgccgcgccgcctgcccgcagtgccgcgcc
gcggtggagccgggctcgctgcgccccaaccgctcgctgggcgccatggcggggctggcc
cgggccctggaggaggtggcggcgcggccgctgtgccccgagcacggcgagctcctggcg
ctgttctgcgagccctgcgccgccccgctctgcgcgctctgccgggacgggcccgggcac
cgccagcaccgtgtccgccccgccgacgaggccgcacgggagctccgggagacactccag
agcaacctgctttttctacaaaaacagaaggaaaaattgaagcccaaaggagaccagaaa
actgatgacctgctgatgacggtggtctcagaggcgcagcgtgtgcgcgacacctttgag
gagctgcagcagttcctgaaggagcaggagaagatcttcctggcccagctcgagcggatg
tcccaggagcttcttgagaagagccatgaatacagctccagggtttcagagagggactcg
ctgctggacacggtgattgcgcagatcgaggagaaacgggaccagccggtggtcgagttc
ctcatggatgttggcaaaatcctgagcagctgcgaggcagccaaggccccgatcccagag
ccggtttccccggagctgcagaggagcgttgagagcctgtctgagatgagccagctgatc
gtggacatggtggccaaattcaaagtgaacctgcagaagcagatagacagtgaaaaggag
acagtgatgctggacccggagacggcgagtcctcacctgaccctttcggaggattacaaa
accatccggctcggaggtgggaaacaaaacctccctgatacctccaagagattcacaggc
agccccagtgtcctgggctcccgggggttcacgtctgggaggcattactgggagctggag
gtcgggaaagggaacagctgggccgtaggggtggccctggagtccgtgcagaggaaggag
tcgctcagcctggccatggggaagatctgggctctgcggctggactgggacgaccagtac
agagcactccgcatgcctcctgtcctgctggaagtgagggaagagctccacagaatcagg
gtccacctggactatgaagcgggccgagtgaccttctacaacgcagagagcatgacgcag
attttgcagtttgaggccaccttcactgagaaagtcttcccatatttttggctctggtca
cgagaaacccacatccagctgtgtgactga

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