Corvus cornix (hooded crow): 104686465
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Entry
104686465 CDS
T03546
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104686465 (ZEB1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
104686465 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
104686465
NCBI-ProteinID:
XP_039404198
LinkDB
All DBs
Position
2:complement(14564391..14688462)
Genome browser
AA seq
1111 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREGSTKSCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLVSKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANSCKNEKLPEDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGTEAEKPESPVPSEAGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSSPTDND
DQAATTNVSEPQNSTNNSENPVSTTKSQTLPEGSTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVIDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPPKQTQANGNQDERQDTSSEGIPNAEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKRETEERDSAEPEEMGPEVLSSEHVVVRASPSQ
IDSDERESLTREEEEYSEKEEEEEEEKDIEGLQEEKECRELQEVGDAEEEAAVEEEGKTE
ENKNDEAVNQASNAEPEVIQNNGQVSEENNK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattataacaatgtggtagaagcaaactcagattcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacagatgcagcagactgtgatgctagtgtgccagaagat
gacttgccaacagaccatatagtattaccagaaaacagtgaaagagaagggagtacaaag
agttgctgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcaa
acagatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgag
caaaaccatgaccctaatgttgaagaattccttcaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacgccagaagctagtggtcaggatgaa
aatggaacacctgacgcgttttcccagctgctcacgtgcccgtactgtgatcgagggtac
aagcgtttcacctctctgaaggaacacattaaataccgccatgaaaaaaacgaagataac
ttcagttgctccttgtgcagttacacatttgcgtacagaacgcagctcgaccgccacatg
acatcacacaaatcaggaagagatccaagacatgtgacgcagtccagtggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaacccctttgcagaatggggtctttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtattgaaagtggca
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgtgtccaaa
gaacaagaaacaatcaacaatgcatctatacaacaagctggccattccctcatttcagcg
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatagttgcaaaaatgagaaattaccagaagatctcacagtgaagtctgagaaagat
aagaactttgaaggagagaccaatgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggaacagaagctgagaaacccgagtcccctgtcccatcagaagctggggag
aacaacttatctcctggtcagccacctttaaagaaccttctatcgctcctaaaggcgtat
tatgcattaaatgcacaaccaagcgcagaagagctttcaaaaatagcagattctgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagtcccacagacaacgat
gatcaagcagcaactacaaatgtgagtgaaccccagaacagcacaaataactcagaaaat
cctgtcagtacaacaaaatctcagactttaccagagggatcaactctgaatggttcacac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaagaagagccacaaatagaacctcttgacctttctcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttatagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctactacagttagccctgcagttcatgagacaccaccaaaa
cagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaataccc
aatgcagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcatta
ttgaggcataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacaaaa
gcatttaaacacaaacaccatttgattgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagcggttttcacactcggggtcttactctcagcacatg
aaccatcgctactcctactgcaaaagggagacggaggagcgcgacagcgccgagccggag
gagatgggcccggaggtgctgagcagcgagcacgtggtggtcagggcgtccccctcgcag
atcgactcggatgagagagagagcctaaccagggaggaggaggaatacagcgaaaaagag
gaagaggaggaagaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaa
ctacaagaagtaggggatgcagaagaagaagcagcagtagaagaagaagggaaaactgaa
gagaacaagaatgatgaagctgtaaatcaagcaagcaatgcagaaccagaagttatacaa
aataatgggcaggtgtcagaagaaaataacaaataa
DBGET
integrated database retrieval system
