Corvus cornix (hooded crow): 104686479
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Entry
104686479 CDS
T03546
Symbol
PTPN23
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 23
KO
K18040
tyrosine-protein phosphatase non-receptor type 23 [EC:
3.1.3.48
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104686479 (PTPN23)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104686479 (PTPN23)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104686479 (PTPN23)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
104686479 (PTPN23)
Cilium and associated proteins [BR:
ccw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104686479 (PTPN23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
Y_phosphatase
ALIX_LYPXL_bnd
PTP-SAK
Y_phosphatase3
Tc-R-P
DSPc
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
104686479
NCBI-ProteinID:
XP_039427574
LinkDB
All DBs
Position
2:379711..390996
Genome browser
AA seq
1740 aa
AA seq
DB search
MEAVPRMPMIWLDLKEAGEFAFNAAVKKFVLKNYGENPENYNEELRKLELLRQSAVSVPR
DFEGCSTLRKYLGQLHFLQSRIPMGNGQDAAVPVTWTEIFSGKAVTHEDIKYEQACVLYN
LGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFTYLRDHFPHSYSVDMSHQILSLNINL
MLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENSETASLLGKIQKDWKKL
VQMKIYYFAAVAHLHMGKQAEEQQKFGERVIYFQSALDKLNEAIKLAKGQPETVQEALRF
TMDVIGGKYNSAKKDNDFIYHEAVPALDTLQSVKGAPLVKALPVNPTDPAVTGPDIFAKL
VPMAAHEASSLYSEEKAKLLRDVMAKIEAKNEVLDQFMDSMQLDPETVDNLDMYNHIPPV
LMEKCAALSVRPDTVRNLVQSMQVLSGVFTDVEASLKEIRDLLEEDEVQERKLQELLGRV
PPAPGSPPGLAEVSKECSKYLELHEKASFTNTELHRAMNLHLGNLRLLGGPLEQVRAALP
TPTLSEDDKQVLQNLKRILAKVQEMRDQRLSLEQQLREMIQKDDITTSLVTTDRSEMKKL
FEEQLKKYDQLKVYLEQNLAAQENVLKALTDANVKYAAVRKALAEVEHKWNTTVQTLVAS
YEAYEDLMKKSQEGKDFYTDLEGKAAKLLERARAACQASEAHRQQLLERELKKQPPPRPT
APKPPLQKKPLELEAGGPEAAELGSLVLSELPEELRSLPPELLPGPLAQLPPPALAALAG
GLRAPEPYMLPGGVASAPLPPWPPRPLPRALPPARAPRRPQPLSSHRGRPGAAPAALGPG
RARPQLGRPSALPGRAPDPRPGTAGLWGGPHVLPPHSSPQHGPLPAPAYGLGQPGAAPGP
LRPPVPGAAPVGAQPGVGGPEPPGTRPATTTVDSVQAPISSCSVPPRGPPGPFLPPQRPG
GPRPPSPTLRGGFSPSGHRLRPLFPRHSPRPPLPRATSTSPQVPSCPRAEPRPLCPSSNP
PASPWPPRQFPQQPFTGPGGQLPPPAPGQAPLPPQLYQLPGQDQLPPTGLAPHPGAVPFP
RTPAQNGPPALGGLQPVPPGSPALPFCPSPAPPSAQLPPGTMALGPPAPAPPSQAPSPGP
VPGPVVVQGPLVPSPAPSPSPALPMQPPAPRPPPALPPPGAGDSPFPRQSPCPADLLSSS
PESQPGGSAAPGGLLQPTKAGLQEGQRPRAVQLIEADPYAEPERVRRLLAELEQFRALAE
RLERPAPGGGSELDAVWKELQEAQERDARQRSIAIARCYSMKNRHQDIMPYDRNRVVLRS
GKDDYINASRVEDLSPYCPALIATQAPLLGTAADFWLMIYEQKVSVVVMLVSEQELDKKV
LRYFPSERGQPVAQGPLTLVLTSLRVTPTHVERMLTLQYRDQSLKRTVAHLQFTSWPELG
LPDSKGSLLRFIQEVHGHYLHQRPLHTPVVVHCSSGVGRTGAFCLLYAAVQEVEAGNGIP
DLAQLVRRMRQQRKHMLQEKLHLKFCFEAVLLHAEQVLLRHGVGGPALAKPPNSTSPKLY
LQQDPQDLVXGGDVPISSIQATIAKLSIKPGGPSTEPGEGWGVDPVPAPDPVDAEVPLVI
PDGVVDGVGAPGPEPPALRPPVPEHRGDTENSNHVGGESPEGPGGAARAPRCPPASSSSS
LELLASLTPEAFSLDASLKGKQRMNKQNFLQAQPGEGLRGPRPSDDPLSMLDPLWTLNKA
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgccccgcatgcccatgatctggctcgacctcaaggaggccggggagttc
gccttcaacgccgccgtcaagaagtttgtcctgaagaactatggggagaacccggagaac
tacaacgaggagctgcggaagctggagctgctccggcagagcgccgtcagcgttcccagg
gatttcgagggctgcagcaccttgcgcaagtacctggggcagctgcacttcctgcagagc
cgcatccccatgggcaacgggcaggacgccgccgtgcccgtcacctggactgagatcttc
tcgggcaaggcagtgacacatgaggacatcaagtacgagcaggcctgtgtcctctacaac
ctgggagctctgcattccatgctgggagccatggacaagcgagtgtccgaggagggcatg
aaagtttcctgcacccacttccagtgcgccgcgggcgccttcacctacctgcgagatcac
ttcccacattcctacagcgtggacatgagccaccagatcctcagcctcaacatcaacctc
atgctgggccaggcacaggagtgtctcctggagaagtccatgctggacaacaggaagagc
ttcctcgtggcccggatcagtgcccaggtggtggattactacaaggaggcctgccgggcg
ctggagaactcagagacagcctcgctgctgggcaagatccagaaggattggaagaaactg
gttcaaatgaagatctattattttgctgctgtggcccacctgcacatggggaaacaggcc
gaagagcagcagaagtttggggaaagggtcatctacttccagagcgctctggataagctc
aacgaggccatcaagctggcaaaggggcagcctgaaaccgtgcaggaagctctgaggttc
accatggatgttatcggtgggaagtacaattcagccaaaaaggacaatgacttcatctac
cacgaggctgtgcctgcgctggacactctgcagtccgtcaaaggtgcccccctggtgaag
gctctgcccgtcaaccccacggaccccgcggtcaccggccctgacatcttcgccaagctg
gtgcccatggctgcccacgaggcctcgtccctgtacagcgaggaaaaggccaaactgctg
cgggatgtgatggccaagattgaagccaagaacgaagtgctggaccagttcatggactcc
atgcagctggaccccgagaccgtggacaacctggacatgtacaaccacatcccgcccgtg
ctgatggagaaatgcgccgcgctcagtgtgcgcccggacaccgtccgcaacctcgtccag
tccatgcaggtgctctctggggtcttcaccgacgtggaggcgtcgctgaaggagatccgg
gacctgctggaggaggacgaggtgcaggagcggaagctgcaggagctgctggggagggtc
ccgccggcgccggggtcccccccggggctggccgaggtgagcaaggagtgctccaagtac
ctggagctgcacgagaaggcgagtttcaccaacaccgagctgcaccgcgccatgaacctg
cacctgggcaacctgcgcttgctcggcggccccctggagcaggtccgggccgcgctgccc
acccccaccctctccgaagacgacaaacaggtgctgcagaacctgaagcggatcctggcc
aaggtgcaggagatgcgggaccagaggctgtccctggagcagcagctgcgggagatgatc
cagaaggacgacatcaccacctcgctggtcaccaccgaccgctccgagatgaagaagctc
ttcgaggagcagctgaagaagtacgaccagctcaaggtgtacctggagcagaacttggct
gcccaggagaacgtgctcaaggccctgactgacgccaatgtcaaatacgcggccgtgcgc
aaggccctggccgaggtggagcacaagtggaacacaaccgtgcagaccctggtggcctcc
tacgaggcctatgaggacctgatgaagaagtcccaggaggggaaggatttctacacggac
ctggaggggaaggcggccaagctgctggagcgggcgcgggccgcatgccaggccagcgag
gcgcaccggcagcagctgctggagagggagctgaagaagcagccgcccccccggcccacg
gcccccaagccccccctgcagaagaagccactggagctggaggccgggggccccgaggcc
gccgagttgggctccctggtgctgtcggagctgccggaggagctgcggagccttcccccg
gagctgctgcccgggcccctggcccagctgccccccccagcgctggccgccctggccggg
gggctgcgggcccccgagccctacatgctgcccgggggcgtggccagcgccccactgccc
ccctggcccccacgcccccttccccgggcactaccgcctgcccgggccccccgccgtccc
cagcccctttcctcccaccgggggcgtcccggggcagctcctgcagccctcggccccggc
cgggcccgcccccagctcggccgcccctcagctcttcccggccgcgcccctgatccgcgc
cccgggacagccgggctttgggggggcccccacgtgctgcccccgcactcgtccccccag
cacgggcccctgcccgcccccgcctacggcctgggccagcccggggcagcccccggcccg
ctccggccccccgtgcccggggcagcccccgtgggtgcccagccgggggtgggtggcccc
gagcccccgggcacgcgcccggccaccaccacggtggacagcgtccaggcccccatctcc
agctgctccgtgcccccccggggacccccgggccccttcctgcccccccagcgcccgggg
ggcccccggcccccttcccctacactgcggggggggttcagcccttcggggcaccggctc
aggccccttttcccccggcacagcccccgcccgcctttgcccagggccaccagcacttcc
ccccaggtcccttcatgcccccgggccgagcccaggcccctctgcccttccagcaacccc
cccgcgtccccctggcccccccggcagttcccccagcagcccttcaccggtcccgggggg
cagctgccccccccggccccggggcaggccccgctgcccccccagctctaccagctcccc
gggcaggaccagctgccccccacgggcctcgccccgcacccgggggccgtgcccttcccc
aggacccctgcccagaacggccccccggccctgggggggctccagccggtgccccccggg
tcccccgcgctgcccttctgccccagcccggccccccccagcgctcagctgccccccggg
accatggcgctgggcccccccgcgcccgccccgcccagccaggccccctctcccggcccc
gtgccgggccccgtggtggtccagggcccgctggtcccgtccccggccccgtccccgtcc
ccagccctgcccatgcagcccccggcgccgcgcccccctcccgcgctgcccccgccgggc
gccggggactcgccgttccctcggcagagcccctgccccgccgacctgctgtcgtccagc
cccgagagccagcccggcggctcggccgcgcccggggggctgctgcagcccactaaggcg
gggctgcaggaggggcagcggccccgggccgtgcagctcatcgaggccgacccgtacgcg
gagcccgagcgcgtccggcggctgctggcggagctggagcagttccgcgccctggccgag
cggctggagcggcccgcgcccggcggcggctccgagctggacgcagtctggaaggagctg
caggaggcccaggagcgcgacgcccggcagcgctccatcgccatcgcccgctgctactcc
atgaagaaccggcaccaggacatcatgccctacgaccgcaaccgcgtcgtgctgcgctcg
ggcaaggacgactacatcaacgccagccgcgtggaggacctgtccccgtactgccccgcc
ctcatcgccacccaggcccctctgctcggcaccgccgccgacttctggctcatgatctac
gagcagaaggtgtccgtggttgtcatgctcgtgtccgagcaggagctggacaagaaggtg
ctccggtacttcccgtcggagcggggccagcccgtggcgcagggccccctgaccctggtg
ctcaccagcctgcgcgtgacccccacgcacgtggagcggatgctgacgctgcagtaccgc
gaccagagcctcaaacgcaccgtggcccacctccagttcacctcctggcctgagctgggc
ctgcccgacagcaaggggagcctcctgcgcttcatccaggaggtgcacggccattacctg
caccagcgcccgctgcacacccccgtcgtggtgcactgcagctccggcgtgggccgcacc
ggcgccttctgcctgctctacgccgccgtgcaggaggtggaggctgggaacggcatcccg
gacctggcgcagctggtgaggcggatgcggcagcagcgcaagcacatgctacaggagaag
ctgcacctcaagttctgcttcgaggccgtcttgctccacgccgagcaggtgctgctgcgc
cacggcgtgggcggccccgccctggccaagccccccaacagcacctcccccaagctctac
ctccagcaggacccgcaggacctggtgnctgggggggatgtgcccatcagctccatccag
gccaccatcgccaagctcagcatcaaaccgggggggcccagcacggagcccggggagggc
tggggggtggatcctgtccccgctccagaccctgtggatgctgaggtgccgctggtgatt
cctgatggcgtcgtggacggtgttggtgcccctggccccgagccccccgccctgaggccg
cccgtccccgagcaccggggtgacactgagaacagcaaccacgtggggggggagagcccc
gaggggccggggggggccgccagagccccccgctgccccccagcctcctcctcctcctca
ctggagctcttggcctcgctgacgcccgaggccttcagcctggacgcgtccctcaagggc
aaacagcgcatgaacaagcagaacttcctgcaggcgcagccgggtgaggggctccggggg
ccccggcctagcgacgaccccctcagcatgctcgaccccctctggaccctcaacaaggcg
tga
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