Corvus cornix (hooded crow): 104686501
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Entry
104686501 CDS
T03546
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104686501 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccw01007
]
104686501 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104686501 (GARS1)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104686501 (GARS1)
Enzymes [BR:
ccw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
104686501 (GARS1)
Amino acid related enzymes [BR:
ccw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
104686501 (GARS1)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104686501 (GARS1)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
104686501 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
DUF5915
Motif
Other DBs
NCBI-GeneID:
104686501
NCBI-ProteinID:
XP_039405466
LinkDB
All DBs
Position
2:complement(3868528..3893698)
Genome browser
AA seq
685 aa
AA seq
DB search
MDGPQAEALLAPLRNAVRQQGELVRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQP
KDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRHHFIQEEQ
ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAE
KKAEMENVLTQLDNYGQQELADLFVNYNVKSPVTGNDLSPPVSFNLMFKTSIGPGGNMPG
YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
VDPSEKNHPKFQDVADLNILLYSAKAQVSGQSAHVMRLGDAVQQGVINNSVLGYFIGRIY
LFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR
ATKVPLIAEKHLKEPRTVNIVQFEANKGAIGKAYKKDAKVVMEYLSMCDECYISEMEQLL
NEKGEFTVETEGKTFMLTKDMVTVKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTFR
IREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRTGISHKVDDAAGSI
GRRYARTDEIGVAFGITIDFDTVNRTPHTATLRDRDSMRQIRAEISELPAIIRDLANGYL
TWADVEAKYPQFEGQETGKKDTIEE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccgcaggccgaggcgctgctggcgccgctccggaacgcggtgcggcagcag
ggagagctggtaaggaagctgaaggaagaaaaagctccccaggtggacatagacagagct
gtagcagagctcaaagctcggaagagggtcctagaagcaaaggagctggccttacagccc
aaagatgatatcgtggacagagttaagatggaagacactctcaaaaggaggtttttctat
gaccaagccttttctatttatggaggagtcagtggtctgtatgactttgggcctgttggg
tgtgctttgaagaacaacatcattcaagcatggagacatcactttattcaggaagagcaa
atcctggagattgactgcaccatgctcacacctgagccggttctaaagacttctggccac
gtagacaagtttgctgacttcatggtgaaagatgtgaaaaatggggaatgttttcgtgct
gatcatctcttaaaagcccacctgcagaaactgatgtctgacaagaagtgcacggcagag
aaaaaggcagaaatggaaaatgttctaacacagttggacaattatggccagcaagagctt
gcagatctctttgtgaactacaatgtgaagtcacctgtcactggcaatgacctgtcccct
cctgtttctttcaatctgatgttcaagacctccattgggcctggaggaaacatgcctggc
tacctgaggccagaaactgcacagggaatattcctcaacttcaaacgtcttctggagttt
aaccaaggcaaattgccttttgctgctgcccagattggaaattccttcaggaatgaaatc
tcaccccgctccggccttatcagagtgagggaattcaccatggcagaaattgagcacttt
gtggaccctagtgagaaaaaccaccccaagtttcaggacgtggcagatctcaacatcctc
ctgtactcggccaaggcgcaggtcagcgggcagtctgcgcacgtcatgcggctgggagac
gctgtccagcagggtgtgatcaataactcggttctcggttacttcattggcagaatctac
ctcttcctcacaaaggtcggtgtgtccccggagaagctgcgcttccgacagcacatggag
aatgagatggctcattatgcctgtgactgctgggatgcagagtccaaaacctcctatggt
tggattgagatcgttggctgtgctgatcgttcctgctatgacctttcctgccatgcccgc
gccaccaaagttcctcttatagctgagaagcatctcaaagaacctagaacagtcaacatt
gttcagtttgaggcaaataagggagccattggcaaagcctacaagaaggatgccaaggtg
gtgatggaatatctttccatgtgtgacgagtgctacatcagcgagatggagcagctgctc
aatgagaaaggggaattcactgttgaaactgaagggaaaacttttatgttaacaaaggac
atggttactgtgaagagatttcagaaaacattacatgtggaagaaatcatcccaaatgtc
attgagccctcatttggcattggaaggatcatgtacacagtgtttgaacacacattccgc
atccgggaaggagacgagcagagaacattcttcagcttcccagctgttgtagcaccattc
aagtgctctgttcttcctctgagccagaatcaggaattcatgccttttgtcaaggaatta
tccgaagcactgaccaggaccggcatctctcacaaggtggatgatgcagcggggtccatc
ggccggcgctacgcccgcacggacgagatcggcgtggccttcggcatcaccatcgacttc
gacaccgtgaaccgcaccccgcacacggccacgctgcgcgaccgcgactccatgcgccag
atccgcgccgagatctctgaacttcctgccatcatccgagacctggccaacggttatctc
acctgggctgatgttgaggcaaagtatccacagtttgagggacaagagactggcaaaaag
gacacaatagaggaataa
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