Corvus cornix (hooded crow): 104686529
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Entry
104686529 CDS
T03546
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03271
Virion - Rotavirus
ccw04145
Phagocytosis
ccw04510
Focal adhesion
ccw04512
ECM-receptor interaction
ccw04514
Cell adhesion molecule (CAM) interaction
ccw04517
IgSF CAM signaling
ccw04518
Integrin signaling
ccw04530
Tight junction
ccw04810
Regulation of actin cytoskeleton
ccw04820
Cytoskeleton in muscle cells
ccw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
104686529 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104686529 (ITGB1)
04514 Cell adhesion molecule (CAM) interaction
104686529 (ITGB1)
04517 IgSF CAM signaling
104686529 (ITGB1)
04518 Integrin signaling
104686529 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104686529 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104686529 (ITGB1)
04530 Tight junction
104686529 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104686529 (ITGB1)
04810 Regulation of actin cytoskeleton
104686529 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104686529 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104686529 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104686529 (ITGB1)
04515 Cell adhesion molecules [BR:
ccw04515
]
104686529 (ITGB1)
04090 CD molecules [BR:
ccw04090
]
104686529 (ITGB1)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104686529 (ITGB1)
Exosome [BR:
ccw04147
]
Exosomal proteins
Proteins found in most exosomes
104686529 (ITGB1)
Cell adhesion molecules [BR:
ccw04515
]
Integrins
Integrin beta subunits
104686529 (ITGB1)
CD molecules [BR:
ccw04090
]
Proteins
104686529 (ITGB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104686529
NCBI-ProteinID:
XP_019138747
LinkDB
All DBs
Position
2:14166389..14209846
Genome browser
AA seq
814 aa
AA seq
DB search
MRKSLLSSSARLARANFKWLTCAGILCCLIWHGFAQQGGSDCIKANAKSCGECIQAGPNC
GWCKKTDFLQEGEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLENREVTNRKKGAAEK
LKPEAITQIQPQKLALHLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSL
GTALMLEMEKITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSL
TSEGNKFNELVGKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFA
GDGKLGGIVLPNDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVY
KELKNLIPKSAVGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGV
NDTQEDGRKCSNISIGDEVRFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICEC
QCQSEGEPNSPACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEI
CSNNGECICGQCVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPN
FTGSACDCSLDTTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHK
DCVQCRAFDKGEKKETCSQECMHFNMTRVESRDKLPQPGQSDPLSHCKEKDVDDCWFYFT
YSVNSNGEANVHVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFA
KFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatctttgctatcatcatctgcaaggttggccagggctaatttcaaatggctc
acatgtgctggcattctctgttgcttgatatggcatggatttgctcagcaaggtggaagt
gactgcataaaagctaatgcaaagtcatgtggagaatgtatacaagcaggaccaaactgt
ggctggtgtaaaaaaacagactttttgcaagaaggagagccaacgtctgcccggtgtgat
gacttggcagcactgaagagtaaaggctgccctatggaagatatagaaaatcccagaggc
agcaaacaggtgctcgaaaatagagaagtaacgaatcgtaagaaaggcgctgcagagaaa
ctgaaaccagaagccattacacagatccagccacagaaattagcgctgcatctaagagtc
ggggaaccccaaacattttcattaaagttcaagagagctgaagactatcctattgacctt
tattatcttatggacctctcctattctatgaaagatgatttagagaatgtgaaaagtctc
ggaacagctctgatgttagagatggaaaaaataacttcagactttcggattggttttggc
tcttttgtggagaaaactgtgatgccttatataagtacaacaccagccaaactcagaaat
ccttgtacaggggaccagaactgtacaagtccatttagctataaaaatgtgcttagcctt
accagtgaaggaaacaaattcaatgaacttgtaggtaaacagcacatttctgggaactta
gattctcctgaaggtggatttgatgcaataatgcaggttgcagtttgtggggaacaaatt
ggctggaggaatgttacaaggctattagtgttttccacggatgctggattccactttgca
ggagatggtaaacttggtggaattgttctaccaaatgatgggaaatgtcatctggaaaat
aatgtgtacacaatgagccactattatgattatccctctattgctcatctggtacagaaa
cttagtgagaataatattcagacaatctttgctgttactgaagagtttcaggcagtctat
aaggaactgaaaaatctgataccaaaatcagcagtgggaacattgtcttcaaattccagc
aacgtgattcagctgatcattgatgcatacaattccctttcttcagaggttatcctggaa
aatactaagctaccaaaaggagtgacaatcagttacaagtctttctgcaagaatggagtg
aatgacacacaagaagatggaaggaagtgctctaacatttcaattggagatgaggttaga
tttgagattaatataacagctaatgaatgtccaaagaaagaacaaaatgaaacaattaaa
attaaaccactgggattcactgaagaagtggaaattaatctccagttcatctgtgagtgt
cagtgtcaaagtgaaggagaacctaacagtccagcctgccatgcaggaaatggaacattt
gaatgtggtgcatgcagatgtaatgaaggacgtattggaagactatgtgaatgtagcaca
gatgaagtaaatagtgaggacatggatgcttactgcaggagagagaacagtacagaaatc
tgcagtaacaatggagaatgcatttgtggacaatgtgtgtgcaagaaaagggaaaacacc
aatgaggtgtattctggcaaatactgtgaatgtgacaacttcaactgtgatcgatcaaat
ggtttaatctgtggaggaaacgggatctgcaagtgcagagtgtgcgagtgtttccccaac
ttcactggcagcgcctgcgattgttccttggatactacaccatgtatggcatctaatggg
cagatttgcaatggaagaggaacctgtgaatgtggcacctgtaactgtacagatcccaaa
ttccaaggccccacatgtgaaatgtgtcagacttgccttggtgtctgtgcagagcacaag
gactgcgttcagtgcagagctttcgataagggagagaagaaggaaacgtgttcccaggaa
tgtatgcatttcaacatgacgcgggtggagagccgggacaagctgccgcagcccggccag
tccgatcccctgtcccactgcaaagagaaggatgttgatgactgctggttctacttcact
tactctgtcaactcaaatggtgaagccaatgtccacgtggtggagaccccagagtgcccc
agtggtcctgacatcattcccattgtagctggtgtggttgctggaattgttcttattgga
cttgcattgctattgatttggaaactactaatgatcattcacgacagaagagaatttgct
aaatttgaaaaggagaagatgaatgccaagtgggatacgggtgaaaatcctatttacaag
agtgcagtgacgactgtggtcaatcctaaatatgagggaaaatga
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integrated database retrieval system
