Corvus cornix (hooded crow): 104686702
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Entry
104686702 CDS
T03546
Symbol
TRIM23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104686702 (TRIM23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ccw04031
]
104686702 (TRIM23)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104686702 (TRIM23)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104686702 (TRIM23)
GTP-binding proteins [BR:
ccw04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
104686702 (TRIM23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
MMR_HSR1
zf-RING_2
zf-C3HC4
ANCHR-like_BBOX
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
104686702
NCBI-ProteinID:
XP_010393631
LinkDB
All DBs
Position
Z:3047169..3069009
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AA seq
579 aa
AA seq
DB search
MAALAINKAGAGPEGGRGPGAGGRGPAGATVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGPAGQYGTAEE
GIGLSGESIIRCDEDEAHVASVYCTVCATHLCADCSQLTHSTKTLAKHRRVPLADKPHEK
TMCSQHQVHAIEFVCLEEGCQASPLMCCVCKEYGKHQGHKHSILEPEANQIRASILDMAH
CIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGVGMAHTEHVPGTAENARSCVRAYFSDL
HETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVL
AKQEITRLLETLQKQQQQFTELADHVQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVVDSSHRDRVSEAYSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKL
CCGRSWYIQGCDARSGTGLYDGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctggctataaacaaggccggggccgggccggagggtggccgcgggcctggg
gctggcggtcgcggcccggcgggcgctacggtgaaggttcttgagtgtggagtctgtgaa
gatgtattttctttgcaaggggacaaagttccccggctgcttttgtgcggccatactgtc
tgccatgactgtcttacccggcttccccttcacggcagagcagttcgttgtccttttgat
cgacaagttactgaactaggagattctggtgtctggggattgaaaaagaactttgctttg
ttggaactcttggaacggttgcagaatggacctgctgggcagtatgggacagctgaagaa
ggcattggtctctctggagagagtatcattcgttgcgatgaagatgaagcccatgttgca
tctgtgtattgcactgtttgtgccactcacctgtgtgcagactgttcccagcttactcat
tctactaagactctagcgaagcacaggcgtgtacctcttgctgataagcctcatgagaag
acgatgtgctcccaacaccaagtgcatgccattgagtttgtttgtttagaagagggctgt
caggcgagtcctctcatgtgttgtgtctgcaaagagtatgggaagcatcaaggtcataag
cactccatcttagaaccagaagcaaaccagattcgtgcatccattttagacatggctcac
tgtataagaactttcacagaagaaatctcagattattccagaaaactagttggaattgtt
cagcatatagaaggaggagaacaaatagttgaagatggagttggaatggcccatactgaa
catgtaccaggaactgcagagaatgctcgctcatgtgtccgagcctatttttctgatctt
catgaaaccctttgtcgtcaggaggaaatggctctaagtgttgttgatgctcacgtgaga
gagaagttgatttggctaaggcaacagcaagaagacatgaccattctcctgtcacaggtt
tcaacggcttgccttcactgtgaaaagactttacaacaggatgactgcagagtagtgttg
gccaaacaggaaattacaagattgctagagacattacagaaacagcagcaacagtttaca
gaacttgcagatcatgtacagctggatgctagcatacctgtgacttttacaaaggacaac
agggtacatattggaccaaaaatggaaattcgggttgttactttaggattagatggagct
ggcaaaacaactattttgtttaagttaaagcaagatgaattcatgcagccaattccaaca
ataggttttaacgttgaaacagtagaatacaagaatttaaagtttactatttgggatgta
ggaggaaaacacaaattgaggcctttgtggaaacattattatctcaatacgcaagcggtg
gtgtttgttgttgatagcagtcacagagacagggtcagtgaagcatacagtgaacttgca
aaattgttaacagagaaggaattgcgggatgccttgctcttgatctttgctaataaacag
gatgtagcaggtgctctgtcagtggaagaaatcacagagctgttgagtctccacaaactc
tgctgtggccgtagctggtatattcaaggttgtgatgcccgaagtggtacaggactttat
gatggattggactggctttcaaggcagctagtggctgctggtgtcctggatgtggcttaa
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