Corvus cornix (hooded crow): 104686708
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Entry
104686708 CDS
T03546
Symbol
ERBIN
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104686708 (ERBIN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
104686708
NCBI-ProteinID:
XP_010393642
LinkDB
All DBs
Position
Z:complement(2801815..2921308)
Genome browser
AA seq
1449 aa
AA seq
DB search
MTTKRNLFLRLVPCRCLRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEE
LPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVV
EASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTM
SRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKN
NIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYLPDSIGGLIS
VEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFL
PEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPLIPLQKEADPDTQKT
VLTNYMFPQQPRTEEVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNL
KRYPTPYPDELKNMVKTVQTIVHRLKDEESTEDTAKESKREVQTVSVKDVGVKTSETGSI
KNKADERKQFSTGSSVQKPSEPEAEHSTANSQMTALVKTLQNTKTIVNHEEMLEQESEEL
SSDEEMKMAEMRPPLIETSINQPKVVALSNSKKDDSKDTDSLSDEATHNSNQNNSNCSSP
SRMSDSVSLNTDSSQDISFCSPDKETHATVLSKIRREDENLNNLLQNGGELSITVEEKLN
MQEKVTNLSEYELSIEERLGLIGKGVDLSTPMEESHKLDQINMNINKLVSEEAVPVPVEK
LETQKMVSVMGFLNNNTKEESQHLENGNKYHINKVNGHPEETVPSPSKDKLPKSTTVGGD
SADLSVSRSTEDLSPQRSGPVMKSHSITSMDSGGLKIYDSVNENGSQQLNSAVKSGSDTA
DGKNIVRSKSATLLYDQPLQVFPGSSSSSDLVSSTKTVFKFDSNHNPEGANVVRGSVTGG
AQMLCAPQYNIQYSSSAAAKDALWPQKQNTQVEQGTLPPSRLLRSDSTETPSYVKHSGNM
NFSNHNNVRASAVYSTHQRMAGRHTDLWAVPPGATRHTLQRQSSVSSTASINIGDSGPSR
RTQVPEGDYLTYRDLHSMGRAPAVMPGQQRPLSARTYSIDGPSVTRPQSARPSVSEIPER
TMSVSDFNYSRTSPSKRANPRVNSEHSLLDPAGKTKVPHDWREQVLRHIEAKKLEKSMLS
RSFNSNYAAVSSFHYGSSRDLHGSQGSVALSVADGRGSGVHIVRHPQASAPGDQCQDEVF
ISGQQNYSSATLSLKDIPPDSMKKTAVQMPLTNGQMCQPQRLQANYSQVHHLPPQSSVAR
HPSREQLIDYLMLKVAHQPPYTQSQCSPRQGHELAKQEIRVRVDKDPELGFSISGGVGGR
GNPFRPEDDGIFVTRVQPDGPASKLLQPGDKIIQANGYSFINIDHGQAVSLLKTFQNAVE
LIIVREVSS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaagcggaatttgtttttgcggctggtgccatgccgctgtctgcgtggagag
gaggaaactgtgacttcactcgattattctcactgcagcctggaacaggtgcctaaggag
atttttacttttgaaaagaccttggaagaactgtatttagatgctaatcagattgaagag
cttccaaagcaactttttaactgtcagtctctacacaagctgagtttgccagacaacgat
ctaaccacattgccagcatccattgcaaatctcattaatctcagggaactggatgtcagc
aagaatggcatacaggagtttccagaaaatataaaaaactgtaaagtcttgacagttgtt
gaggcaagcgtaaatccaatttcaaagctgccagatggattttctcaactgttaaaccta
acacagctgtacctgaatgatgcttttcttgagtttttgccagccaattttggcagatta
actaaactccagatattggaacttagagaaaaccagttaaaaatattgccaaaaaccatg
tccagactgactcagttggagagactggacttaggaagtaatgaattcacagaagtgcct
gaagtacttgaacaactgagtggattaaaggaattttggatggatggtaatagactaaca
cttattcctgggttcataggcactttgaaacaactgacctacttggatgtttctaaaaac
aacattgaagtagttgaagaaggtatttcaggctgtgaaagcctgcaagacctactgtta
tccagtaactcacttcagcaactgccagagtctattggttctctgaaaaaggtgacaaca
cttaaaattgatgaaaaccagttaatttatttgccagactccataggaggattaatatca
gtagaagaactggactgtagtttcaatgagattgaaacattgccttcgtctgttgggcag
ctctcgaatataagaacatttgctgcagatcataactttttaactcagctgccatcagag
attggaaactggaagcatgtaacagtgttgtttctgcattctaataaacttgaatttctc
cctgaagaaatgggtgatatgcagaaattaaaagtcatcaatctgagtgacaatagactg
aagaatttaccatttacctttacaaaactgcaacaactcactgctatgtggctatcagac
aatcagtctaaaccacttatccctcttcaaaaagaagctgaccctgacacacagaaaaca
gtacttactaattacatgttccctcagcaaccaaggactgaggaggttatgttcatatct
gataatgaaagtttcaatccatctctgtgggaggaacaacggaaacagcgtgctcaggtg
gcatttgagtgcgatgaagacaaagatgagagagaggcaccaccacgggagggcaatttg
aagaggtatccaactccatatcctgatgaactgaagaatatggtcaaaacagtccagaca
attgtacacagactaaaggatgaagaatctactgaagatactgcgaaggagtcaaaacga
gaagtccagacagtttctgtaaaagatgtgggggtaaagacttcagaaactggttcaata
aagaacaaagccgatgagagaaagcagttttcaacaggaagctctgtgcagaagcctagt
gaaccagaagctgagcacagcactgcaaattcacagatgactgcacttgttaaaaccttg
cagaacacgaaaacaattgtcaaccatgaagaaatgcttgagcaggagtcagaagaattg
tcctctgatgaagagatgaaaatggcagaaatgcgaccaccactgatagaaacctccata
aaccaaccaaaagtggtagccctaagcaacagcaaaaaagatgattcaaaagacactgat
tccttatcagatgaagctacccacaatagtaatcagaataacagcaactgttcctctcct
tctcgaatgtcagattctgtttccttgaatactgacagtagccaagatatttctttctgt
tctcctgacaaagaaacacatgctactgttttatccaaaatcaggcgagaagatgaaaat
ttgaataatcttttgcaaaatggaggagaattgagtataacagtagaagaaaaactaaat
atgcaagagaaggttacaaatttgtctgaatatgaattaagcattgaagaaagattaggc
ctgataggaaaaggtgttgatctaagcactcctatggaggagtctcacaaattagaccaa
ataaacatgaatatcaataaactggttagtgaagaggcagtgccagttcctgtagaaaag
ttagaaacacagaaaatggtttcagtaatgggctttttgaataataacacaaaagaagaa
agtcagcacttggaaaatggaaataaatatcatataaataaagtaaatggacatcctgag
gaaacagtaccgtctcccagtaaagacaaactaccaaaaagcactacagttggtggggat
tctgctgacctgtctgtttctagaagcactgaagatttgtcaccacagagaagcggtcct
gtgatgaaatcccacagcatcacaagtatggacagcggtgggctgaaaatctatgatagt
gtaaatgagaatggatctcaacagctaaactcagcggtaaaatcaggatctgatactgca
gatgggaaaaacatagtccgaagtaaatctgctactcttctctatgatcagcctttgcag
gtttttcctgggtcgtcgtcatcatctgatttagtatcttctacaaaaacggtgttcaag
tttgactcaaatcacaatcctgaaggtgctaatgtagtgagaggatcagtgacaggtggt
gcacagatgctctgtgctccccaatacaatattcagtacagcagcagtgcagcagcaaaa
gatgccttgtggccccagaaacaaaacacccaagtagagcaaggcactttacctccttca
cgtctgcttaggtctgacagtacagaaactcccagctatgtaaagcattctggcaacatg
aatttctccaatcataacaatgtccgggccagtgctgtgtacagcactcatcagcggatg
gctgggagacacacagatctgtgggctgttccaccaggagcaaccaggcacactcttcaa
aggcagagcagtgtatcttctacagcttccataaatatcggggatagtggcccttcaagg
cggacccaagtgcctgaaggggactacttaacatacagagatttgcattcaatgggaaga
gctccagcagtaatgccgggacagcagaggcctctctctgcccggacatacagcattgat
ggtccaagcgtgacccgaccacagagtgcgcggccgtcggtgagcgaaataccggagaga
actatgtcagtcagtgacttcaattactcacggactagcccctcaaagagagcaaaccca
agggttaactctgagcactcgttgctagaccctgcaggaaaaactaaagtccctcatgac
tggagggaacaggtgcttcgacatattgaggctaaaaagctagaaaagagcatgctgtct
cggtcctttaattccaattatgctgcagttagcagctttcactatggcagctctagggat
ctgcatggcagccagggtagtgttgccttgagtgttgcagacggaagaggttctggtgtg
cacattgttcgacatccccaggcatctgctccaggagaccagtgccaggatgaagtattc
atttcgggacagcagaattactcatctgccacgcttagtctcaaagatattcctccagac
agcatgaagaaaacagctgtgcagatgcctttaacaaatggacaaatgtgccagcctcag
agacttcaggcaaactacagccaagtccatcatctccctcctcaatcatcagttgcaagg
catccatctagagagcaattaattgattatctgatgttgaaagttgcccaccaacctccc
tatacccagtcccagtgctctccgagacaaggtcatgagttggcaaagcaagagattcga
gtgagagtggacaaggatccagaacttgggtttagtatatcaggaggagttggtggtaga
ggaaatccgttcagaccggaagatgatggcatatttgtaaccagagtgcagccagatgga
cctgcatctaagctgttacagccaggggataaaataattcaggctaatggatacagcttc
atcaatattgatcatggacaagcagtgtctttgctaaagacttttcagaatgcagtggaa
ctcatcattgtgcgagaagtttcttcataa
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integrated database retrieval system