Corvus cornix (hooded crow): 104686742
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Entry
104686742 CDS
T03546
Symbol
TAF1C
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104686742 (TAF1C)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104686742 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
104686742
NCBI-ProteinID:
XP_039423608
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All DBs
Position
Z:complement(14633548..14638050)
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AA seq
935 aa
AA seq
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MEFPAALFPSYFGAGPPREEGGPAPVAGWGEHGQVLEGGPGRRQAQPAFMPRRGATGERW
EAADAAAVPVLLPRAGCWIPSPAPQDILYRSGLCKKLRAGKSGATLDFARQLGHFFVDHP
EDAFGSLGHLLHKNFYLGNSKLKRPARNSTIRMTALVEDIDRLEARRGCPRQHLASRLRW
FSHLCRDWLFEVPLGLLADCLHEELMQQWSNLLFDDSLTGGALAWLPAEDGGTPMGRLVH
PGGQAMNHLYFQDVVLEELPRARGSPAQFELSGRVRQVAAARVDGEDFVGVRSDYHCGVW
RVPGRTGAAPAPLQVIRTDVPASCLTVSPHLPGELSVCTQSGTVYLWSVGTGLQQLRHDP
QTMFFRDHSPWRWSDFTAHPRVLSCADRTGLQCLDARAPKKCHFDLFKVGEEAGCQQGER
VVLPMYLGRAHPSQYLVTTQFSVYVLDERLPLVPVLKWAHMMKAPPLFAHLMPGNPGRSH
QVLLGASRTQELLLLQYRGGSQSACQLAGTPQKLHSIGGCLQHLPTQLPHRQHLLQQRLE
APAAGLTATLQEDGPHKSMVVFQLSEAGDVFCQRLTHKAAQPPAPPSRDETTTAPGSSPL
FEAPASSPQGLGGEEEEEEEQTFYLSNLEVIINEEEEEEDVGTPAPLEEAELQEPCASPQ
PSLAVPSPAAALRYCRWLRALSRACRDPPRHTWHPSLSQRRLFTRRDLQGPAGPSNLQRQ
MRQRLHQAMREGGRIQRWGLSAVQPPPLPQTLEPAXGSRPLSARLTAAWAGDWEQWWEER
TSFSVAQRQRALRERRRRQKRARGRRSLSASFTSSLTYQSELSELSDAGPPLLSPGHPPV
LSQEGSSPAGSPAVRSPPTSPAPDEALLSSQSLRCRGIPKERRKTLRDYLSVWAEGPPEP
PEPPGSQASQLCIPSSQSQLSSASQPRRKRPRMGF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccggccgctctcttcccgtcctacttcggcgccggcccgccgcgggaggag
ggtggccccgcgccggtcgccggctggggcgagcacgggcaggtgctggagggcggcccc
ggccgccgccaggcgcagccggcgttcatgccccgccgtggcgcgacgggcgagaggtgg
gaagccgccgacgctgcggccgtgccggtgctgctgcccagggcgggctgctggatcccc
tcgcccgcacctcaggacatcctgtaccgcagcggcctgtgcaagaagctccgggcaggc
aagtccggagccactctggatttcgcccggcagctgggtcatttctttgtggatcaccca
gaagatgcttttggctccctggggcacctgctgcacaagaacttctacctgggcaactcc
aagctgaagagaccagcccggaatagcaccatacggatgacagccctggtggaggacatc
gaccgcctggaggcccgacgcggctgcccccggcaacacttggcctcccgcctacgctgg
ttctcccacctgtgccgtgactggctcttcgaggtgccactggggctgctggcagactgc
ctgcacgaggagctgatgcagcagtggtccaacctgctcttcgacgacagcctcacaggg
ggagcactggcctggctgcccgctgaagatggggggacacccatgggccgcctcgtgcac
cccggagggcaggccatgaaccacctctatttccaggacgtggtgctagaggagctgccc
cgtgcccggggctccccagcgcagtttgagctcagtgggcgtgtccggcaagtggctgca
gcccgtgtggatggggaagattttgttggggtccgctcagactatcactgtggtgtttgg
agggtgccgggcaggacaggggcagctcccgccccactacaggtcatccgcaccgacgtg
cctgcctcctgcctcactgtcagccctcaccttcccggggagctgtctgtctgcacccag
agtgggaccgtctacctctggagcgtcgggactgggctgcagcagctccgccatgacccc
cagaccatgttttttcgggaccattcaccctggcgctggagtgacttcactgcacaccca
cgggtgctcagctgtgctgaccgcacaggcctgcagtgccttgatgcccgggcccccaag
aaatgccacttcgacttgttcaaggtgggcgaggaagctggctgccagcagggcgagcgt
gtggtgctgcccatgtacctgggcagggctcacccctcacagtatcttgtcaccacccag
ttctctgtgtatgtgctggacgagcggttgccacttgtgcctgttctgaagtgggcacac
atgatgaaggcccctccactatttgcacacctgatgccagggaatcctgggaggagccac
caggtgctgctcggcgcatcccgcacccaggagctgttgctgttgcaataccgggggggc
agccagtcagcctgtcagctggcggggactccacagaagctgcacagcattggggggtgc
ctgcagcacctgcccacccagctcccacaccgccaacaccttctccagcagcgcctcgaa
gccccggcagcagggctgactgccacgctgcaggaggatgggccacacaagtccatggtg
gttttccagctctctgaggctggggatgtcttctgccagaggctgacccacaaggcagca
cagccccctgcacccccatcgagggatgagaccacaacagcccctggctcttcccctctc
tttgaggctccagccagcagcccacagggcttgggcggtgaggaagaagaggaggaagag
caaacattctacttgtccaacctggaggtgattatcaatgaggaggaagaggaggaggat
gtgggcacaccagcacccctggaggaagctgaactgcaggagccctgtgccagtccccag
ccctccctggcagtacccagcccagctgcagccctgcggtactgccgctggctgagggcc
ctttccagggcctgcagggatccccctcggcacacctggcaccctagcctcagccagagg
cgcctcttcacccgcagagatctgcaggggccggcgggccccagcaacctgcagaggcag
atgcgccagcggctgcaccaagccatgcgggaaggtggtcgcatccagcgctgggggctt
tcggccgtccagccaccgcccctgccacagaccctggagccggcanggggctccagaccc
ctaagcgcccgtctgacagcggcctgggctggggactgggagcagtggtgggaggagagg
acgagcttcagtgtggcacagagacagcgggcactgcgggagcggcggcggcgacagaag
cgagcccggggccgccgcagcctttcggccagcttcacctcctccctcacctaccagtct
gagctgtccgagctgagtgatgcgggccccccgctgctctcccccggccacccacccgtt
ctctcccaggagggctcctcaccagcaggcagccccgcagttcgcagccccccgacctca
ccggcacccgatgaagccctgctgtcctcacagagcctgcgctgccgcggcatccccaag
gagcgtcggaaaacgctgcgggactatctgtccgtgtgggccgaggggccacccgagccc
ccagagccccctggcagccaggccagccagctgtgcatcccttcttcccagagccagttg
tcctccgcctcgcagccccgtcgcaagcgcccacgaatgggcttctga
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