Corvus cornix (hooded crow): 104686985
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Entry
104686985 CDS
T03546
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104686985 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104686985 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104686985 (USP16)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104686985 (USP16)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104686985 (USP16)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104686985 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
104686985
NCBI-ProteinID:
XP_010394109
LinkDB
All DBs
Position
1:complement(16995412..17014355)
Genome browser
AA seq
823 aa
AA seq
DB search
MGKKRIKGKTAQSDESPDILKPVCKHIRKGLDQGHLRKALQSVEWHVCQDCKADSKTQEK
AEEEETDEGTSIWLCLKCGHRGCDRNSADQHALKHYKTPRSDPHCLVLSLDNWSVWCYLC
DNEVPYKTSTLLGQTVDFVRKQVGIDSSHAVEKQQENKEVENKKVEKDSKNEQEKEVSLK
EENSHSAANGEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGTTVKIESPEL
CMEPQLIKLDQPGPLTLAMHQFVTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHE
LLRYLLDGMRTEEIQQISVGILKAMSDSNKENEEELKKKIKEYEKKNGIRSFVDRIFGGE
LTSTIMCEECRTVSLVHEPFLDLSLPILDVQKVKITKRENIKENKEKESEDEEDKINDHY
LKQKDEPPGTSKHLQKKVKKQARKQAKSQRRQQKLQGKILHLSDLCATEQPEIDVEYKQE
SETEMSSETLDKKQEEESSHECKDHCLTQKDLSIQGNSTEIQSRHENTGKPEQECEENES
LTDLSVEGLDSPMKFVNGLDNLSLKEEDDDNEDEEELAIDFSKLHLGASESDMSTMDGLQ
PVPSKTCEVSTDDPETAFCTLANREELNPEEGSIHHCLYQFTRNETLTETNKLLCDVCTQ
RHCGPKNNIKSEKKFVYTNAKKQMLISLAPPILTLHLKRFQHAGFNLRKVNRHIKFPEVI
DLAPFCTAKCKNVAEGNTKVLYSLYGVVEHSGTMRFGHYTAYVKMRAMNSHLSDLVLRGQ
SQALETEPVKGQWFHISDTHVQPVSVSKVLSSQAYLLFYERLL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacgcatcaaaggcaaaactgcacagtctgatgagtctccggatatactg
aaacctgtgtgcaagcatattcgtaaaggactggaccaagggcatctgagaaaggcactg
cagagtgtggaatggcatgtttgtcaggactgcaaggcagacagtaagacacaagagaag
gctgaggaggaggagactgatgaaggcacttcgatatggttatgcctaaaatgtggccat
aggggctgtgacagaaattctgcagaccagcatgccttaaagcattataaaacaccaaga
tcagatccccactgtttggttctcagtttggacaactggagtgtgtggtgctacctatgt
gataatgaagttccatataaaacttcaacccttttgggccagactgtggattttgttaga
aaacaagttggtattgactcatcacatgcagtagaaaaacaacaagagaacaaagaagtt
gaaaataagaaagtagaaaaagacagcaaaaatgaacaagaaaaagaagtttcacttaag
gaagaaaattctcattcagctgctaatggagaagtcactgtgaaaggacttagtaacttg
gggaatacatgtttctttaatgcagtgatgcagaatttatcacaaactccagtcctgagg
gagctgcttaaagaagctaaaatgcctggcacaacagttaaaattgagtcacctgagcta
tgcatggaacctcagctaataaaactagatcagccaggtcctttaacactagccatgcat
cagttcgtgacagaaatgcaagagacaaaaaaaggggtagtgacgcctaaggaacttttt
gctcaggtttgtaaaaaagcaatacgatttaaaggttatcagcagcaagacagtcatgaa
ttgcttcgttacttacttgatggaatgagaacagaagaaattcagcaaataagtgttgga
atactaaaggcgatgagtgactctaacaaagaaaatgaagaagaacttaaaaagaaaatt
aaagaatatgaaaagaaaaatggaatacgaagttttgtagatcgaatctttggtggagaa
ttaaccagcacaattatgtgtgaggaatgcagaactgtatccttggtccatgagcctttc
cttgatttgtcacttcccatactagatgttcagaaagtgaaaattacaaagagagaaaac
attaaagaaaacaaagaaaaggagtccgaagatgaagaggataaaatcaatgaccattac
cttaagcagaaagatgagccccctggtacaagtaagcaccttcagaaaaaagtgaagaaa
caggccagaaaacaagccaagagccagcgccggcagcaaaaacttcaaggaaagatactt
cacttgtcagatctctgtgcaactgaacagccagagatagatgttgagtacaagcaagaa
tcagagactgaaatgagctctgaaactcttgataagaagcaagaagaggaatcatcacat
gagtgcaaagatcactgcttaactcagaaagacttgagtatacagggaaatagtacagaa
attcagagcaggcatgaaaatacaggaaagccagaacaagagtgtgaagaaaacgagtct
ctcacagatctctctgtggaaggcttagattctcctatgaagtttgtcaatggccttgac
aacctgtctttgaaagaggaggatgatgacaatgaagatgaggaagagcttgctatagac
ttttcaaaactccacttgggtgccagtgaatctgacatgagtaccatggatggccttcag
cctgttcctagcaagacgtgcgaagtatctacagatgaccctgaaacagcattttgtact
ctggcaaacagggaagagctgaacccagaggaaggttcaatccatcactgtttgtatcaa
tttacccgtaatgaaacacttactgagaccaataaactactgtgtgatgtgtgtacacaa
aggcattgtggaccaaagaacaacataaaaagtgaaaagaagtttgtttatactaatgcc
aaaaagcagatgctcatctctctagctcctccaattttaacccttcacttaaagaggttt
cagcatgctggatttaatctgcggaaggttaacaggcatatcaagttcccagaagtgata
gacttggctcctttctgtacagctaaatgtaaaaatgtggctgaagggaatacaaaggtc
ttgtactctctctatggagttgttgaacacagcggaacaatgaggtttgggcactacact
gcctatgttaaaatgagagctatgaacagccacctctctgatcttgtccttcgaggacaa
tctcaagctttagaaactgagccagtcaaaggtcagtggttccacatcagcgatacacac
gtacaacctgtctctgtgtccaaagtgctgagctcccaagcctatcttctgttctatgag
aggctgctgtaa
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