Corvus cornix (hooded crow): 104687035
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Entry
104687035 CDS
T03546
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104687035 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104687035 (GTF2E1)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
104687035 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
104687035 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
CUSTOS
PyrI_C
Motif
Other DBs
NCBI-GeneID:
104687035
NCBI-ProteinID:
XP_010394233
LinkDB
All DBs
Position
1:complement(21681416..21730753)
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AA seq
442 aa
AA seq
DB search
MTDPDVLTEVPAALKRLAKYVVRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPICFSTFTDLEANQLFDPRTGTFRCTFCETEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKERAAGAGSGAAAGLAGGHHREA
WTTKGPSYEDLYTQNVVISMEDQEDLNRSASEGKPARERPIWLRESTVQGAYDPDEIKDG
SRDLDVFQEREEGRAALDDNEEVMRALLIHEKKTPSASTVTVGGAAPLSGGNASDSESET
SESEEESPPRPTATATTAYGLEEEEEDEEFEVVAEDPTVTVAGRPHSYSQVSQRPELVAQ
MTPEEKEVYIAMGQRMFEDMFD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccagacgtcctcactgaggtccctgcagctctcaaacgccttgccaaatat
gtggtgcgtggcttttatggcattgagcatgctttggctctggacatcctcatcaggaac
ccctgcgtgaaggaggaggacatgctagagctcctgaagtttgacaggaagcagctgagg
gctgtcctcaataccctcaagggtgacaagttcatcaaatgcaggatgagggtcgagaca
gctcccgatggcaaaaccacacgccataactattacttcatcaactaccgcctgctggtg
aacgtggtcaagtataagctggaccacatgcgccgcaggatcgagaccgatgagagagac
tccaccaatcgtgcctcttttaagtgccccatttgcttcagcactttcacagatttggag
gccaaccagctgtttgaccccaggacaggaactttccgctgtaccttctgtgagactgaa
gtggaggaagatgagtcggcaatgcccaaaaaggatgcaaggacactcgttgcaagattt
aatgagcagattgagcccatttatgccctgcttcgtgagacagaagatgttaacctagcc
tatgaaatcctggagccagaacccacagagattcctgccctgaagcagagcaaggagcgt
gcagcgggtgctggttcaggggcagcagctggccttgcaggtggacaccatcgggaagca
tggactacaaaaggaccatcatatgaggacttgtatacccagaatgtcgtcatcagcatg
gaggaccaggaggatcttaaccggtctgcaagtgaaggaaagccagccagagagagaccc
atttggctgcgtgagagcacggtgcagggggcttatgaccctgatgaaatcaaagatggg
agccgggatctggatgtgttccaggagcgtgaggagggccgggcagccctggatgacaat
gaggaggtgatgcgtgccctgctcatccatgagaagaagacaccttccgcttccactgtc
acggtcggcggtgccgctcctctctctggcggcaatgcgagtgactccgagagcgagacg
agcgagtcggaggaggagtcccctccccgccccaccgccacggccaccacagcgtatggg
ctggaggaggaggaggaggatgaagagttcgaggtggtggcagaagaccccactgtcaca
gtggctgggcgtccacattcttacagccaagtgagccagcgccctgagctggtggcccag
atgacaccggaggaaaaagaggtttacatagccatggggcaacgcatgtttgaggacatg
tttgattaa
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