Corvus cornix (hooded crow): 104687140
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Entry
104687140 CDS
T03546
Symbol
CLSTN3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104687140 (CLSTN3)
Cell adhesion molecules [BR:
ccw04515
]
Cadherins
Cadherin related
104687140 (CLSTN3)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
SMN_G2-BD
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104687140
NCBI-ProteinID:
XP_039416583
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Position
1:28383553..28398896
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AA seq
975 aa
AA seq
DB search
MGDPRPRAAVLLPLLCLCAALPGSASNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFAL
DKDAPLRYAGEICGFRIHGSGVPFEAVILDKATGEGLIRAKEPVDCEAHKEHTFTIQAYD
CGEGPDGANTKKSHKATVHVRVNDVNEFAPVFVEKLYRVAVTEGKLYDRILRVEAIDGDC
SPQYSQICYYEILTPNIPFLIDNDGNIENTEKLQYSADRVYKFTVTAYDCGKKRASDDAE
VEIQVKPTCKPSWQGWNKRIEYTPGAGSLALFPTIHLETCDEPLWNIQATVELQTNHVAK
GCDRDNYSEKSLRKLCGAASGEIDLLPVPSPTANWTARLSVHYSQDSSLIYWFNGSQAAQ
VPLVNGPNGHEGLSDHFTLSVWMKHAVVPGKGRREEETVICSTVQSEDGYSHYSLAVHGC
RISFLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYVDGVSYDPALIHDNG
LIHPPRPEPSIMIGACWTEEKNREKIKGSENSTDSVQGDPLSIHHYFHGYLAGFTVRPGS
LESREVIECLYACREGLDYSDFDSLGKGMKVHVNPSQSLLTLEGDDVETFNHAIQHVAYM
NSLRFATPGVRPLRLTTAVKCFSEESCVSIPDVEGYVVVLQPDAPQILLSGNAHFAHPAS
DFEAPEGIPLFPNLQITCSISHQVEAKKDENWHGTVTDTRMSDEIVHNLDGCEISLVGDD
LDPEREYLLLDGALLQQRGLELVNTSAYLTITGVESIAVYEEILRQVSYHINHGAALYER
KFHLSCTEMNGRYSSNEFTVEVNVLHSMNRAAHPSHILSSQQFVHRGHHLPAELSGHSLA
STHNSPMVPSAATVIIVVCVGFLALMVILGILRIHSLHRRGVGQEVPGAAESGHTSTAGK
ESDMFWDDSALTIIVNPMESYQSCQERAAGSVEGRAGEGMEDDEDSTDSETPDSPDSSDM
NDRHIIGKSDVSHRY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccctcggccccgcgccgccgtccttctccctctgctctgcctctgcgctgcg
ctgcccggcagcgcctccaacaaagcaaacaagcacaaaccatggattgaagccgagtat
cagggcattgtcatggagaatgacaacaccgtcctgctcaacccgccgctgttcgccctg
gacaaagatgccccactgcgctatgcaggtgaaatctgtggcttcaggatccatgggtca
ggggtaccttttgaagctgtgatcctggacaaagctacaggagaggggctgatccgggcc
aaggagccagtggattgtgaagcacataaggagcacacattcaccatccaggcctatgac
tgtggagagggacctgatggagcaaataccaaaaaatcacacaaggccacagtgcacgtt
cgagtaaacgatgtgaatgagtttgctcccgtctttgtggaaaagctgtatcgcgtggca
gtgacggagggaaagctgtatgaccgcatcttgcgggtggaggccatcgatggggactgc
tccccgcagtacagccagatctgctactatgagatcctgacccccaatattccctttctc
attgacaatgacgggaacattgagaacacggagaagctgcagtacagtgcagatcgggtc
tacaaattcacagtgacagcctatgactgtgggaagaagagggcatctgatgatgctgaa
gtggaaatccaggtgaaacccacgtgcaagcccagctggcagggctggaacaaaaggatt
gagtacacccctggtgcaggcagcctcgcgctcttccccaccattcacctggagacctgt
gatgagccactgtggaatatccaggccacggtggagctgcagacaaaccacgtggccaag
ggctgtgaccgagataactactccgagaagtcactgcgcaaactctgtggtgctgcctca
ggagagattgacctgctgccagtgcctagccccacagcaaactggacggcgcggctctcg
gtgcactacagccaggacagcagcctcatctactggttcaatggcagccaggctgcccag
gtgcctctggtgaatggaccaaatggccacgaggggctgagtgaccacttcaccctgtca
gtgtggatgaagcatgccgtggtgcctggcaaaggcaggcgggaagaggagacggtgatc
tgcagtacagtgcagagtgaggatggctactcgcactactctctggctgtgcatggctgc
cggatttctttcctctactggccattgctggaaagtgcaaggcctgtgaaattcctctgg
aagcttgagcaggtctgtgatgatgagtggcaccattatgccctcaacctggagttcccc
acggtcacgctttacgtggatggcgtctcctacgaccctgccctgatccacgacaacggc
ctcatccaccccccacggccggagccctcgatcatgatcggggcctgctggactgaggag
aaaaacagagagaaaatcaaaggaagtgagaactccaccgattctgtgcaaggagatcct
ctgtcgatacaccactacttccatggttacttggctggcttcactgtgcgccctggtagc
ttggagagccgggaggttattgaatgcctgtatgcctgccgtgaggggcttgattacagt
gacttcgacagtctgggcaaagggatgaaggttcatgtgaacccctctcagtccctgctc
accttggagggtgatgacgtggaaaccttcaaccatgcaatccagcacgtggcttacatg
aattcactgcgctttgctacccccggtgtccggccactcaggctcaccactgctgtcaag
tgtttcagtgaggagtcctgtgtctccattcctgatgtggaaggctacgttgtggtgcta
cagcctgatgccccccagatcctgctgagtggcaatgcccactttgctcatcctgcgtca
gactttgaggctccggaaggaattcccctgttccccaacctccagatcacctgctctatt
tctcaccaggtggaggccaaaaaggatgagaactggcacggtaccgtgacagacacacga
atgtcagatgagattgtgcacaacctggatggctgcgagatctcattggtaggagacgac
ttggacccagagagggagtacctgctcctggatggggcactgctgcagcagcggggcctg
gagctcgttaacacctctgcctacctgaccatcacaggcgtggagagcattgcagtttac
gaggagatcctccgccaggtctcctaccacatcaaccacggtgctgccctctatgaaagg
aagtttcacctgtcctgcacggagatgaacggacgctactccagcaatgagtttactgtc
gaggtgaatgttctccacagcatgaaccgagccgctcatcccagccatattctgagctcc
cagcagttcgtgcaccgaggccatcatttacccgcagagctgtctgggcacagtttggca
agcacccacaacagcccaatggtccccagtgctgccactgtcatcatcgtggtgtgtgtg
ggcttcctggcacttatggtgatcctcggcatcctgcgcatccactccctgcaccggcgg
ggagtggggcaagaggtccctggggctgctgagtcggggcacaccagcactgcaggcaaa
gagagcgacatgttctgggacgactcggccctcaccatcatcgtcaaccccatggagtcc
taccagagctgtcaggagagggcagcaggaagtgtggagggcagagctggcgagggcatg
gaggatgatgaggacagcaccgactcggagacacccgactccccggacagcagtgacatg
aatgaccggcacatcatcggcaaaagtgacgtctctcaccgctactag
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